Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SETP7-201ENST00000552169 453 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.79□□□□□ -1.64
COL6A2P12110 AP001429.1-201ENST00000602568 530 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AL121932.1-201ENST00000605542 214 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AL050343.2-201ENST00000607338 280 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AL627230.1-201ENST00000613077 211 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AL591926.8-201ENST00000616876 211 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 LINC00901.1-201ENST00000617252 152 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC009248.2-201ENST00000619826 254 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AP001784.1-201ENST00000624107 428 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.79□□□□□ -1.64
COL6A2P12110 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL6A2P12110 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.79□□□□□ -1.64
COL6A2P12110 AL672167.1-205ENST00000641112 3080 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL6A2P12110 C4BPAP1-201ENST00000415474 1893 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL6A2P12110 AC139713.2-215ENST00000641428 5037 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC004972.1-201ENST00000623934 2209 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.78□□□□□ -1.64
COL6A2P12110 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
COL6A2P12110 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL6A2P12110 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL6A2P12110 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.78□□□□□ -1.64
COL6A2P12110 AF186996.5-201ENST00000418098 904 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 NCOR1P3-201ENST00000420479 303 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.78□□□□□ -1.64
COL6A2P12110 OR4K11P-201ENST00000431829 904 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.78□□□□□ -1.64
COL6A2P12110 snoU109.4-201ENST00000458953 143 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 RPL7AP28-201ENST00000464513 571 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 RN7SL319P-201ENST00000480656 221 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 RPS23P1-201ENST00000491662 432 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.78□□□□□ -1.64
COL6A2P12110 RNU6-27P-201ENST00000516146 107 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 RNA5SP92-201ENST00000516437 110 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 RNU6-1153P-201ENST00000516760 105 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 RNU7-30P-201ENST00000516835 62 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.78□□□□□ -1.64
COL6A2P12110 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.78□□□□□ -1.64
COL6A2P12110 PSMA2P1-201ENST00000526365 646 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 AP000857.1-201ENST00000532151 543 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.78□□□□□ -1.64
COL6A2P12110 AC087241.2-201ENST00000535801 324 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.78□□□□□ -1.64
COL6A2P12110 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.78□□□□□ -1.64
COL6A2P12110 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 AC078814.3-201ENST00000553036 491 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 OR4K8P-201ENST00000578842 1048 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.78□□□□□ -1.64
COL6A2P12110 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.78□□□□□ -1.64
COL6A2P12110 AC010928.3-201ENST00000587712 541 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 YWHAQP7-201ENST00000603536 658 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 AL161637.1-201ENST00000622380 412 ntBASIC4.78□□□□□ -1.64
COL6A2P12110 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COL6A2P12110 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.78□□□□□ -1.64
COL6A2P12110 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL6A2P12110 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL6A2P12110 TLK1P1-201ENST00000456760 2440 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL6A2P12110 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.77□□□□□ -1.65
COL6A2P12110 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL6A2P12110 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL6A2P12110 FRG1CP-201ENST00000358464 769 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL6A2P12110 RNA5SP428-201ENST00000365129 132 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL6A2P12110 AL122016.1-201ENST00000403365 367 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.77□□□□□ -1.65
COL6A2P12110 RNU4-34P-201ENST00000410431 124 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 RNU6-193P-201ENST00000410977 107 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 VDAC1P9-201ENST00000412766 841 ntBASIC4.77□□□□□ -1.65
COL6A2P12110 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.77□□□□□ -1.65
COL6A2P12110 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.77□□□□□ -1.65
COL6A2P12110 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.77□□□□□ -1.65
COL6A2P12110 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL6A2P12110 OR2AS1P-201ENST00000427827 319 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms