Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AP003467.2-201ENST00000520175 319 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 AL161713.1-201ENST00000555538 145 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 PCNAP1-202ENST00000595299 752 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 AL645944.1-201ENST00000603857 493 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 AL160237.3-201ENST00000604114 1013 ntBASIC2.3□□□□□ -2.04
COL4A2P08572 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A2P08572 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.3□□□□□ -2.04
COL4A2P08572 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A2P08572 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A2P08572 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.3□□□□□ -2.04
COL4A2P08572 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A2P08572 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.3□□□□□ -2.04
COL4A2P08572 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
COL4A2P08572 U8.9-201ENST00000365667 134 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 MIR124-3-201ENST00000384866 87 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 RNU2-2P-201ENST00000410396 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 MTCO3P4-201ENST00000419236 787 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.29□□□□□ -2.04
COL4A2P08572 MTCO3P11-201ENST00000455103 774 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 TRBV1-201ENST00000476502 284 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 MTCO1P31-201ENST00000506355 492 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 AC093770.1-201ENST00000511559 571 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.29□□□□□ -2.04
COL4A2P08572 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.29□□□□□ -2.04
COL4A2P08572 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A2P08572 HIGD1AP10-201ENST00000527837 282 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 AC018630.1-201ENST00000541376 925 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.29□□□□□ -2.04
COL4A2P08572 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.29□□□□□ -2.04
COL4A2P08572 AC074029.1-201ENST00000552531 1044 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 OR4U1P-201ENST00000554958 912 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 AC242628.1-201ENST00000606810 391 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 AL627309.6-201ENST00000606857 840 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.15-201ENST00000611544 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.16-201ENST00000613119 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.12-201ENST00000613778 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.20-201ENST00000613956 192 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.9-201ENST00000615427 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.11-201ENST00000616345 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.2-201ENST00000616535 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.3-201ENST00000617785 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.19-201ENST00000618602 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 RNU2-1-201ENST00000618664 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.6-201ENST00000619225 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.5-201ENST00000619465 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 U2.10-201ENST00000620268 191 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 AL160394.1-201ENST00000624765 724 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.29□□□□□ -2.04
COL4A2P08572 AC117529.2-201ENST00000512159 2068 ntBASIC2.29□□□□□ -2.04
COL4A2P08572 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
COL4A2P08572 HMGB1P13-201ENST00000406019 642 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 RPL30P3-201ENST00000424262 333 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.28□□□□□ -2.04
COL4A2P08572 MTND3P4-201ENST00000453537 303 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 AC090543.1-201ENST00000492168 485 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.28□□□□□ -2.04
COL4A2P08572 AC026412.2-201ENST00000512270 1075 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.28□□□□□ -2.04
COL4A2P08572 ATP5F1P5-201ENST00000526403 760 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 AC078814.3-201ENST00000553036 491 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 AC015712.3-201ENST00000559380 164 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.28□□□□□ -2.04
COL4A2P08572 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.28□□□□□ -2.04
COL4A2P08572 ABI1P1-201ENST00000603375 1120 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 AL137847.3-201ENST00000611521 109 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A2P08572 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
COL4A2P08572 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
COL4A2P08572 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
COL4A2P08572 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A2P08572 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A2P08572 AC022336.2-201ENST00000568966 2538 ntBASIC2.28□□□□□ -2.04
COL4A2P08572 RNU1-91P-201ENST00000364746 163 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 RNA5SP88-201ENST00000365560 109 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.28□□□□□ -2.05
COL4A2P08572 AC234782.4-201ENST00000417646 1048 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 RPL31P45-201ENST00000419532 356 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 PTP4A1P7-201ENST00000423476 514 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 AL031736.2-201ENST00000426573 787 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 ZNF965P-201ENST00000432501 817 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.28□□□□□ -2.05
COL4A2P08572 AC092685.1-201ENST00000447960 1243 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.28□□□□□ -2.05
COL4A2P08572 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.28□□□□□ -2.05
COL4A2P08572 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.28□□□□□ -2.05
COL4A2P08572 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.28□□□□□ -2.05
COL4A2P08572 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.28□□□□□ -2.05
COL4A2P08572 MIR3670-2-201ENST00000582974 65 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 MIR3670-1-201ENST00000584160 65 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 MIR3670-3-201ENST00000584855 65 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.28□□□□□ -2.05
COL4A2P08572 BX322635.1-201ENST00000605804 496 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 AC103710.1-201ENST00000610003 901 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 MIR3670-4-201ENST00000612260 65 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 AC009831.4-201ENST00000620744 325 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 AL356266.1-201ENST00000623311 483 ntBASIC2.28□□□□□ -2.05
COL4A2P08572 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
COL4A2P08572 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
COL4A2P08572 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms