Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SSXP9-201ENST00000417503 292 ntBASIC2.59□□□□□ -1.99
CD74P04233 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.59□□□□□ -1.99
CD74P04233 SAR1AP4-201ENST00000429225 591 ntBASIC2.59□□□□□ -1.99
CD74P04233 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.59□□□□□ -1.99
CD74P04233 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.59□□□□□ -1.99
CD74P04233 HSPD1P15-201ENST00000505573 1122 ntBASIC2.59□□□□□ -1.99
CD74P04233 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.59□□□□□ -1.99
CD74P04233 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CD74P04233 GMPSP1-201ENST00000514075 579 ntBASIC2.59□□□□□ -1.99
CD74P04233 RNU6-885P-201ENST00000516607 104 ntBASIC2.59□□□□□ -1.99
CD74P04233 snoZ278.1-201ENST00000517059 112 ntBASIC2.59□□□□□ -1.99
CD74P04233 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.59□□□□□ -1.99
CD74P04233 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.59□□□□□ -1.99
CD74P04233 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.59□□□□□ -1.99
CD74P04233 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CD74P04233 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.59□□□□□ -1.99
CD74P04233 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.59□□□□□ -1.99
CD74P04233 AC018630.1-201ENST00000541376 925 ntBASIC2.59□□□□□ -1.99
CD74P04233 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.59□□□□□ -1.99
CD74P04233 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.59□□□□□ -1.99
CD74P04233 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.59□□□□□ -1.99
CD74P04233 AC044913.1-201ENST00000557200 430 ntBASIC2.59□□□□□ -1.99
CD74P04233 RPL21P12-201ENST00000559810 515 ntBASIC2.59□□□□□ -1.99
CD74P04233 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.59□□□□□ -1.99
CD74P04233 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CD74P04233 AC005412.1-201ENST00000580812 1049 ntBASIC2.59□□□□□ -1.99
CD74P04233 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.59□□□□□ -1.99
CD74P04233 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.59□□□□□ -1.99
CD74P04233 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CD74P04233 VN1R87P-201ENST00000596706 487 ntBASIC2.59□□□□□ -1.99
CD74P04233 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.59□□□□□ -1.99
CD74P04233 AC091057.2-201ENST00000602594 792 ntBASIC2.59□□□□□ -1.99
CD74P04233 AL162713.1-201ENST00000604480 262 ntBASIC2.59□□□□□ -1.99
CD74P04233 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.59□□□□□ -1.99
CD74P04233 GABRG2-229ENST00000641017 3628 ntBASIC2.59□□□□□ -2
CD74P04233 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.59□□□□□ -2
CD74P04233 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -2
CD74P04233 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.59□□□□□ -2
CD74P04233 Z83843.1-201ENST00000604070 3685 ntBASIC2.59□□□□□ -2
CD74P04233 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.59□□□□□ -2
CD74P04233 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.59□□□□□ -2
CD74P04233 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CD74P04233 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CD74P04233 FAM35BP-202ENST00000497389 3337 ntBASIC2.58□□□□□ -2
CD74P04233 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CD74P04233 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.58□□□□□ -2
CD74P04233 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CD74P04233 OR1S2-201ENST00000302592 978 ntBASIC2.58□□□□□ -2
CD74P04233 RNVU1-3-201ENST00000364313 161 ntBASIC2.58□□□□□ -2
CD74P04233 RNA5SP72-201ENST00000364442 117 ntBASIC2.58□□□□□ -2
CD74P04233 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CD74P04233 SNORA1.3-201ENST00000384676 136 ntBASIC2.58□□□□□ -2
CD74P04233 MIR649-201ENST00000384843 97 ntBASIC2.58□□□□□ -2
CD74P04233 MIR183-201ENST00000384958 110 ntBASIC2.58□□□□□ -2
CD74P04233 RPL21P75-201ENST00000396599 483 ntBASIC2.58□□□□□ -2
CD74P04233 AL035405.1-201ENST00000400795 710 ntBASIC2.58□□□□□ -2
CD74P04233 RPL21P28-201ENST00000401418 483 ntBASIC2.58□□□□□ -2
CD74P04233 AL592114.1-201ENST00000403842 483 ntBASIC2.58□□□□□ -2
CD74P04233 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.58□□□□□ -2
CD74P04233 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.58□□□□□ -2
CD74P04233 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.58□□□□□ -2
CD74P04233 OR1AA1P-201ENST00000419597 916 ntBASIC2.58□□□□□ -2
CD74P04233 AC099677.1-201ENST00000420575 175 ntBASIC2.58□□□□□ -2
CD74P04233 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.58□□□□□ -2
CD74P04233 AC073063.1-201ENST00000434352 607 ntBASIC2.58□□□□□ -2
CD74P04233 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.58□□□□□ -2
CD74P04233 HSPD1P21-201ENST00000436541 245 ntBASIC2.58□□□□□ -2
CD74P04233 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.58□□□□□ -2
CD74P04233 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.58□□□□□ -2
CD74P04233 AC244505.3-201ENST00000454598 187 ntBASIC2.58□□□□□ -2
CD74P04233 RPL21P39-201ENST00000463605 483 ntBASIC2.58□□□□□ -2
CD74P04233 RPL7P49-201ENST00000471402 708 ntBASIC2.58□□□□□ -2
CD74P04233 AC011979.1-201ENST00000472300 483 ntBASIC2.58□□□□□ -2
CD74P04233 RPL23AP11-201ENST00000475260 469 ntBASIC2.58□□□□□ -2
CD74P04233 RPL21P93-201ENST00000480465 489 ntBASIC2.58□□□□□ -2
CD74P04233 AC233702.1-201ENST00000482905 502 ntBASIC2.58□□□□□ -2
CD74P04233 AC087190.1-201ENST00000484462 480 ntBASIC2.58□□□□□ -2
CD74P04233 AC093591.1-201ENST00000491435 481 ntBASIC2.58□□□□□ -2
CD74P04233 RPL21P16-201ENST00000495531 483 ntBASIC2.58□□□□□ -2
CD74P04233 AC021678.1-201ENST00000505195 936 ntBASIC2.58□□□□□ -2
CD74P04233 AC104619.4-201ENST00000510773 249 ntBASIC2.58□□□□□ -2
CD74P04233 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.58□□□□□ -2
CD74P04233 AC122134.1-202ENST00000569111 1201 ntBASIC2.58□□□□□ -2
CD74P04233 RN7SL339P-201ENST00000580597 296 ntBASIC2.58□□□□□ -2
CD74P04233 SNORD39.3-201ENST00000584451 71 ntBASIC2.58□□□□□ -2
CD74P04233 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.58□□□□□ -2
CD74P04233 AC023043.3-201ENST00000593113 385 ntBASIC2.58□□□□□ -2
CD74P04233 AC245036.5-201ENST00000596330 847 ntBASIC2.58□□□□□ -2
CD74P04233 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.58□□□□□ -2
CD74P04233 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.58□□□□□ -2
CD74P04233 GAS5-AS1-201ENST00000602767 694 ntBASIC2.58□□□□□ -2
CD74P04233 AC009464.1-201ENST00000615731 469 ntBASIC2.58□□□□□ -2
CD74P04233 VN1R7P-201ENST00000619242 903 ntBASIC2.58□□□□□ -2
CD74P04233 AC095031.1-201ENST00000623685 672 ntBASIC2.58□□□□□ -2
CD74P04233 AP003476.1-201ENST00000623984 516 ntBASIC2.58□□□□□ -2
CD74P04233 AC080188.3-201ENST00000624842 748 ntBASIC2.58□□□□□ -2
CD74P04233 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
CD74P04233 MTND5P31-201ENST00000419366 1374 ntBASIC2.58□□□□□ -2
CD74P04233 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.58□□□□□ -2
CD74P04233 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms