Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CDC27P2-201ENST00000425026 1922 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SPTA1P02549 SNORA31-201ENST00000362607 130 ntBASIC1.9□□□□□ -2.1
SPTA1P02549 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SPTA1P02549 RPS15AP6-201ENST00000420703 385 ntBASIC1.9□□□□□ -2.1
SPTA1P02549 RPS6P12-201ENST00000432491 726 ntBASIC1.9□□□□□ -2.1
SPTA1P02549 AC004263.1-201ENST00000479327 332 ntBASIC1.9□□□□□ -2.1
SPTA1P02549 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.9□□□□□ -2.1
SPTA1P02549 MTCYBP20-201ENST00000524239 1129 ntBASIC1.9□□□□□ -2.1
SPTA1P02549 AC234775.3-201ENST00000564612 656 ntBASIC1.9□□□□□ -2.1
SPTA1P02549 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.9□□□□□ -2.1
SPTA1P02549 AC016717.2-201ENST00000609089 5141 ntBASIC1.9□□□□□ -2.1
SPTA1P02549 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SPTA1P02549 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.9□□□□□ -2.11
SPTA1P02549 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTA1P02549 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SPTA1P02549 AL513175.2-201ENST00000422071 443 ntBASIC1.9□□□□□ -2.11
SPTA1P02549 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
SPTA1P02549 OR4K11P-201ENST00000431829 904 ntBASIC1.9□□□□□ -2.11
SPTA1P02549 HSPE1P28-201ENST00000443139 211 ntBASIC1.9□□□□□ -2.11
SPTA1P02549 AC002553.2-201ENST00000453217 340 ntBASIC1.9□□□□□ -2.11
SPTA1P02549 MTND3P6-201ENST00000485242 339 ntBASIC1.9□□□□□ -2.11
SPTA1P02549 RN7SKP40-201ENST00000517211 242 ntBASIC1.9□□□□□ -2.11
SPTA1P02549 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.9□□□□□ -2.11
SPTA1P02549 MIR7973-1-201ENST00000614683 76 ntBASIC1.9□□□□□ -2.11
SPTA1P02549 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTA1P02549 XPOTP1-201ENST00000443317 2398 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTA1P02549 AC022336.2-201ENST00000568966 2538 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 AL354719.1-201ENST00000406535 843 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 RNU7-95P-201ENST00000459222 64 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 AC007182.2-201ENST00000489251 402 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
SPTA1P02549 RPL21P5-201ENST00000554662 472 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTA1P02549 CU459211.1-201ENST00000635667 749 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTA1P02549 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTA1P02549 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTA1P02549 Y_RNA.251-201ENST00000364551 99 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 Y_RNA.327-201ENST00000365201 102 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 DEFA7P-201ENST00000382676 285 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTA1P02549 PPP1R2P5-201ENST00000457256 603 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 RPL23AP14-201ENST00000468281 468 ntBASIC1.89□□□□□ -2.11
SPTA1P02549 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTA1P02549 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTA1P02549 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTA1P02549 MTND5P3-201ENST00000438536 1800 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTA1P02549 MIR598-201ENST00000384868 97 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 RNU2-2P-201ENST00000410396 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 AL139156.1-201ENST00000412785 841 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTA1P02549 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTA1P02549 HMGN1P7-201ENST00000491722 313 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTA1P02549 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTA1P02549 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTA1P02549 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTA1P02549 MIR4303-201ENST00000581299 66 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTA1P02549 U2.15-201ENST00000611544 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 AL359198.2-201ENST00000611836 194 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.16-201ENST00000613119 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.12-201ENST00000613778 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.20-201ENST00000613956 192 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.9-201ENST00000615427 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.11-201ENST00000616345 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.2-201ENST00000616535 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.3-201ENST00000617785 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.19-201ENST00000618602 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 RNU2-1-201ENST00000618664 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.6-201ENST00000619225 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.5-201ENST00000619465 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 U2.10-201ENST00000620268 191 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 ZNF542P-204ENST00000482727 1305 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SPTA1P02549 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTA1P02549 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTA1P02549 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
SPTA1P02549 TPMTP3-201ENST00000411928 735 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.88□□□□□ -2.11
SPTA1P02549 TRIM60P13-201ENST00000432350 1283 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 MTND6P18-201ENST00000439477 513 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 AC008526.1-201ENST00000509149 338 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 RNA5SP102-201ENST00000516865 106 ntBASIC1.88□□□□□ -2.11
SPTA1P02549 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SPTA1P02549 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTA1P02549 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTA1P02549 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SPTA1P02549 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SPTA1P02549 AL021368.2-201ENST00000606125 5352 ntBASIC1.87□□□□□ -2.11
SPTA1P02549 MTND5P35-201ENST00000557537 1720 ntBASIC1.87□□□□□ -2.11
SPTA1P02549 AL023807.1-201ENST00000407932 359 ntBASIC1.87□□□□□ -2.11
SPTA1P02549 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.87□□□□□ -2.11
SPTA1P02549 AC234781.4-201ENST00000419384 244 ntBASIC1.87□□□□□ -2.11
SPTA1P02549 AL356806.1-201ENST00000422524 916 ntBASIC1.87□□□□□ -2.11
SPTA1P02549 OR4R2P-201ENST00000530815 597 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms