Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
COL2A1P02458 UBL5P3-201ENST00000475112 231 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC083906.5-201ENST00000503722 328 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC010424.1-201ENST00000506336 297 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC091965.2-201ENST00000512324 613 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.59□□□□□ -1.84
COL2A1P02458 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.59□□□□□ -1.84
COL2A1P02458 PDCL2P2-201ENST00000533651 189 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.59□□□□□ -1.84
COL2A1P02458 AC006518.2-201ENST00000542513 940 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.59□□□□□ -1.84
COL2A1P02458 AL133241.1-201ENST00000556832 487 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.59□□□□□ -1.84
COL2A1P02458 NRBF2P5-201ENST00000603087 788 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC011451.2-201ENST00000604303 598 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC022140.2-201ENST00000623500 188 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AF246928.1-201ENST00000623768 87 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.84
COL2A1P02458 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
COL2A1P02458 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.58□□□□□ -1.84
COL2A1P02458 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
COL2A1P02458 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.58□□□□□ -1.84
COL2A1P02458 AC090971.4-201ENST00000560291 1800 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL2A1P02458 AC138393.1-206ENST00000540997 1886 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL2A1P02458 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 RNU1-75P-201ENST00000347264 129 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 RNU6-697P-201ENST00000363348 107 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 ELOCP17-201ENST00000414751 326 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 RAC1P3-201ENST00000416129 580 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 ELOCP9-201ENST00000418624 239 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 RPL7P53-201ENST00000421245 739 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AC019178.2-201ENST00000423595 505 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AC007563.3-201ENST00000433233 371 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 COX7BP2-201ENST00000437976 242 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.58□□□□□ -1.84
COL2A1P02458 RPL7P36-201ENST00000444633 681 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.58□□□□□ -1.84
COL2A1P02458 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
COL2A1P02458 RPS4XP22-201ENST00000480755 780 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.58□□□□□ -1.84
COL2A1P02458 MTND4LP26-201ENST00000518144 282 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 MTCYBP41-201ENST00000528913 1123 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AL512310.1-201ENST00000548639 172 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.58□□□□□ -1.84
COL2A1P02458 ACTR3BP3-201ENST00000565577 979 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AC012435.1-202ENST00000568772 240 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.58□□□□□ -1.84
COL2A1P02458 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.58□□□□□ -1.84
COL2A1P02458 AC108747.1-201ENST00000609508 535 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AC109347.2-201ENST00000610220 349 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AL139418.1-201ENST00000613613 177 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.58□□□□□ -1.84
COL2A1P02458 AC092656.1-203ENST00000624134 423 ntBASIC3.58□□□□□ -1.84
COL2A1P02458 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.58□□□□□ -1.84
COL2A1P02458 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
COL2A1P02458 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL2A1P02458 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL2A1P02458 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL2A1P02458 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL2A1P02458 RNU4-92P-201ENST00000363783 136 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AL133264.1-201ENST00000407157 562 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AC127526.1-201ENST00000417526 366 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.57□□□□□ -1.84
COL2A1P02458 AC073069.1-201ENST00000428657 441 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AC105272.1-201ENST00000438604 198 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 MTCO1P19-201ENST00000443487 500 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AL627224.1-201ENST00000448334 444 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 BUD31P2-201ENST00000449374 300 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.57□□□□□ -1.84
COL2A1P02458 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.57□□□□□ -1.84
COL2A1P02458 AC104417.1-201ENST00000523974 751 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AL512347.1-201ENST00000566420 503 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 MIR4319-201ENST00000577285 85 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.57□□□□□ -1.84
COL2A1P02458 AL020997.3-201ENST00000602843 359 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AL353621.2-201ENST00000605340 133 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AL450489.1-201ENST00000612071 468 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AC092794.1-201ENST00000612734 582 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
COL2A1P02458 AC079248.2-201ENST00000623779 326 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 IGHVIII-44-202ENST00000636235 289 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AC068137.3-201ENST00000639191 341 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 AC073869.6-201ENST00000640656 341 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL2A1P02458 AC107027.3-201ENST00000565095 3473 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.57□□□□□ -1.84
COL2A1P02458 TTC39DP-201ENST00000416781 1688 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL2A1P02458 AC012020.1-201ENST00000624541 1728 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 NEAT1-202ENST00000501122 22743 ntBASIC3.57□□□□□ -1.84
COL2A1P02458 PWAR6-201ENST00000552334 4618 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
COL2A1P02458 FAM133CP-201ENST00000332869 704 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 RNU6-851P-201ENST00000384565 107 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL2A1P02458 MTND4LP21-201ENST00000415303 295 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms