Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 BX276092.4-201ENST00000452056 248 ntBASIC2.23□□□□□ -2.05
TNFP01375 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.23□□□□□ -2.05
TNFP01375 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.23□□□□□ -2.05
TNFP01375 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFP01375 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFP01375 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFP01375 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.23□□□□□ -2.05
TNFP01375 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.23□□□□□ -2.05
TNFP01375 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.23□□□□□ -2.05
TNFP01375 AL356575.1-201ENST00000603008 283 ntBASIC2.23□□□□□ -2.05
TNFP01375 HSPE1P14-201ENST00000605812 302 ntBASIC2.23□□□□□ -2.05
TNFP01375 VN1R7P-201ENST00000619242 903 ntBASIC2.23□□□□□ -2.05
TNFP01375 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TNFP01375 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TNFP01375 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
TNFP01375 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.23□□□□□ -2.05
TNFP01375 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
TNFP01375 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
TNFP01375 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TNFP01375 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
TNFP01375 AL024474.1-201ENST00000404655 591 ntBASIC2.22□□□□□ -2.05
TNFP01375 AL591034.1-201ENST00000407447 340 ntBASIC2.22□□□□□ -2.05
TNFP01375 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.22□□□□□ -2.05
TNFP01375 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFP01375 AC010095.1-201ENST00000443543 144 ntBASIC2.22□□□□□ -2.05
TNFP01375 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFP01375 AC233982.1-201ENST00000451247 436 ntBASIC2.22□□□□□ -2.05
TNFP01375 AL445669.2-201ENST00000454425 421 ntBASIC2.22□□□□□ -2.05
TNFP01375 AC027673.1-201ENST00000456245 405 ntBASIC2.22□□□□□ -2.05
TNFP01375 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TNFP01375 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFP01375 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.22□□□□□ -2.05
TNFP01375 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TNFP01375 AC112673.1-201ENST00000513168 575 ntBASIC2.22□□□□□ -2.05
TNFP01375 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFP01375 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFP01375 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFP01375 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.22□□□□□ -2.05
TNFP01375 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.22□□□□□ -2.05
TNFP01375 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
TNFP01375 AC010297.1-201ENST00000623948 149 ntBASIC2.22□□□□□ -2.05
TNFP01375 AL121594.5-201ENST00000631724 573 ntBASIC2.22□□□□□ -2.05
TNFP01375 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.22□□□□□ -2.05
TNFP01375 AP001350.1-201ENST00000601906 1524 ntBASIC2.22□□□□□ -2.05
TNFP01375 AC097714.1-201ENST00000511272 1647 ntBASIC2.21□□□□□ -2.06
TNFP01375 U8.8-201ENST00000365399 135 ntBASIC2.21□□□□□ -2.06
TNFP01375 RNU6-253P-201ENST00000384730 105 ntBASIC2.21□□□□□ -2.06
TNFP01375 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TNFP01375 SNORA81-201ENST00000408493 178 ntBASIC2.21□□□□□ -2.06
TNFP01375 AC092638.1-201ENST00000411966 1275 ntBASIC2.21□□□□□ -2.06
TNFP01375 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFP01375 snoU13.26-201ENST00000459452 105 ntBASIC2.21□□□□□ -2.06
TNFP01375 RPS29P12-201ENST00000460178 152 ntBASIC2.21□□□□□ -2.06
TNFP01375 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFP01375 AC104090.1-201ENST00000506341 1171 ntBASIC2.21□□□□□ -2.06
TNFP01375 RPL7L1P13-201ENST00000511702 739 ntBASIC2.21□□□□□ -2.06
TNFP01375 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFP01375 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFP01375 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFP01375 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFP01375 MIR6715A-201ENST00000615929 79 ntBASIC2.21□□□□□ -2.06
TNFP01375 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFP01375 CYP3A51P-201ENST00000633513 256 ntBASIC2.21□□□□□ -2.06
TNFP01375 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TNFP01375 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFP01375 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFP01375 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TNFP01375 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TNFP01375 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TNFP01375 RNU1-51P-201ENST00000365345 176 ntBASIC2.2□□□□□ -2.06
TNFP01375 RNU6-1027P-201ENST00000383998 107 ntBASIC2.2□□□□□ -2.06
TNFP01375 BTBD10P2-201ENST00000404779 676 ntBASIC2.2□□□□□ -2.06
TNFP01375 AC073310.1-201ENST00000423226 1033 ntBASIC2.2□□□□□ -2.06
TNFP01375 RPS6P14-201ENST00000425165 719 ntBASIC2.2□□□□□ -2.06
TNFP01375 AC018634.1-201ENST00000437554 401 ntBASIC2.2□□□□□ -2.06
TNFP01375 HMGB3P12-201ENST00000438745 556 ntBASIC2.2□□□□□ -2.06
TNFP01375 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFP01375 Z99714.1-201ENST00000450463 807 ntBASIC2.2□□□□□ -2.06
TNFP01375 AP000852.1-201ENST00000472460 573 ntBASIC2.2□□□□□ -2.06
TNFP01375 RPL9P6-201ENST00000492764 598 ntBASIC2.2□□□□□ -2.06
TNFP01375 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFP01375 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
TNFP01375 AC092436.1-201ENST00000506450 503 ntBASIC2.2□□□□□ -2.06
TNFP01375 CCNHP1-201ENST00000513311 678 ntBASIC2.2□□□□□ -2.06
TNFP01375 AC025881.1-201ENST00000518851 512 ntBASIC2.2□□□□□ -2.06
TNFP01375 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFP01375 AP000873.5-201ENST00000533906 236 ntBASIC2.2□□□□□ -2.06
TNFP01375 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.2□□□□□ -2.06
TNFP01375 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.2□□□□□ -2.06
TNFP01375 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFP01375 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.2□□□□□ -2.06
TNFP01375 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFP01375 AC105036.1-201ENST00000566222 271 ntBASIC2.2□□□□□ -2.06
TNFP01375 AC009163.5-201ENST00000575421 637 ntBASIC2.2□□□□□ -2.06
TNFP01375 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.2□□□□□ -2.06
TNFP01375 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFP01375 AL160237.3-201ENST00000604114 1013 ntBASIC2.2□□□□□ -2.06
TNFP01375 MIR6132-201ENST00000622083 109 ntBASIC2.2□□□□□ -2.06
TNFP01375 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.2□□□□□ -2.06
TNFP01375 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms