Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC092685.1-201ENST00000447960 1243 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CTDNEP1O95476 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 VN1R104P-201ENST00000505115 1009 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AC006445.2-201ENST00000510061 472 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 TBCAP3-201ENST00000512475 312 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 RNA5SP356-201ENST00000515972 94 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 MTCYBP41-201ENST00000528913 1123 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 HMGB1P6-201ENST00000569046 646 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 MIR4319-201ENST00000577285 85 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AC124283.4-201ENST00000581815 456 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 AL109653.1-201ENST00000603091 248 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 NTAN1P1-201ENST00000603150 646 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AC112503.2-201ENST00000609005 552 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AP003400.6-201ENST00000624698 740 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AC080188.3-201ENST00000624842 748 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 CRYM-AS1-204ENST00000637983 556 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CTDNEP1O95476 AP000526.1-201ENST00000603308 1388 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTDNEP1O95476 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC104446.1-201ENST00000613728 1321 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTDNEP1O95476 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AL138880.1-201ENST00000405824 642 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AL096803.2-201ENST00000450032 677 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTDNEP1O95476 MTND2P39-201ENST00000457230 764 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 RPS27AP9-201ENST00000477681 438 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 HMGB1P38-201ENST00000490557 577 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 MTND3P3-201ENST00000505004 126 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC008565.1-201ENST00000509046 885 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 RN7SKP283-201ENST00000517197 270 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC007536.1-201ENST00000533382 349 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC139103.1-201ENST00000534696 1030 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC027104.1-201ENST00000563702 681 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC091488.1-201ENST00000604239 660 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 AL137843.1-201ENST00000605078 385 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC004832.5-201ENST00000608677 401 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 STMN1P1-201ENST00000617809 440 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AC132825.7-201ENST00000638744 335 ntBASIC2.94□□□□□ -1.94
CTDNEP1O95476 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTDNEP1O95476 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTDNEP1O95476 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
CTDNEP1O95476 AL136520.1-201ENST00000600311 1322 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 RNU6-207P-201ENST00000384137 107 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 SNORD65C-201ENST00000390962 71 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 AL139039.1-201ENST00000401900 692 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 MIR1250-201ENST00000408098 113 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 UBE2V1P11-201ENST00000411559 285 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 Z92545.1-201ENST00000411782 234 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 AC005517.2-201ENST00000424673 553 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 ARL5AP4-201ENST00000430731 512 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 AL035407.2-201ENST00000454090 378 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 AC096725.1-201ENST00000514266 313 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 RNU5A-7P-201ENST00000515979 116 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 RNA5SP320-201ENST00000516263 124 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 RN7SKP96-201ENST00000516948 297 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 AC104115.2-201ENST00000523026 687 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 AP003066.2-201ENST00000529375 555 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 MIR5092-201ENST00000583139 88 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms