Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AL732618.1-201ENST00000623251 301 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AC079228.1-201ENST00000624774 1049 ntBASIC3.54□□□□□ -1.84
SIX3O95343 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX3O95343 U6.98-201ENST00000637157 84 ntBASIC3.54□□□□□ -1.84
SIX3O95343 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SIX3O95343 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX3O95343 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX3O95343 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SIX3O95343 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIX3O95343 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIX3O95343 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIX3O95343 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIX3O95343 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIX3O95343 RNU6-621P-201ENST00000364752 109 ntBASIC3.53□□□□□ -1.84
SIX3O95343 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIX3O95343 AL136116.1-201ENST00000403591 381 ntBASIC3.53□□□□□ -1.84
SIX3O95343 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SIX3O95343 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX3O95343 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX3O95343 AL445584.1-201ENST00000431451 330 ntBASIC3.53□□□□□ -1.84
SIX3O95343 THAP5P1-201ENST00000439089 262 ntBASIC3.53□□□□□ -1.84
SIX3O95343 CYCSP32-201ENST00000440548 321 ntBASIC3.53□□□□□ -1.84
SIX3O95343 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.53□□□□□ -1.84
SIX3O95343 AL353691.1-201ENST00000451332 387 ntBASIC3.53□□□□□ -1.84
SIX3O95343 U3.44-201ENST00000458938 192 ntBASIC3.53□□□□□ -1.84
SIX3O95343 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX3O95343 FCF1P3-201ENST00000496394 590 ntBASIC3.53□□□□□ -1.84
SIX3O95343 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX3O95343 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.53□□□□□ -1.84
SIX3O95343 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX3O95343 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIX3O95343 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX3O95343 COX6CP3-201ENST00000580869 223 ntBASIC3.53□□□□□ -1.84
SIX3O95343 MIR5187-201ENST00000583479 76 ntBASIC3.53□□□□□ -1.84
SIX3O95343 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIX3O95343 AC006254.3-201ENST00000603353 884 ntBASIC3.53□□□□□ -1.84
SIX3O95343 AC006077.1-201ENST00000604746 343 ntBASIC3.53□□□□□ -1.84
SIX3O95343 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SIX3O95343 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX3O95343 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.53□□□□□ -1.84
SIX3O95343 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIX3O95343 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SIX3O95343 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.53□□□□□ -1.84
SIX3O95343 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX3O95343 AP000776.1-201ENST00000530032 1663 ntBASIC3.52□□□□□ -1.85
SIX3O95343 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX3O95343 PRO1804-201ENST00000623780 2050 ntBASIC3.52□□□□□ -1.85
SIX3O95343 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX3O95343 AL161781.1-201ENST00000354277 403 ntBASIC3.52□□□□□ -1.85
SIX3O95343 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX3O95343 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX3O95343 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX3O95343 RNU6-882P-201ENST00000391025 103 ntBASIC3.52□□□□□ -1.85
SIX3O95343 RNU6-952P-201ENST00000391164 108 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX3O95343 RPS3AP26-201ENST00000398259 784 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AL591034.1-201ENST00000407447 340 ntBASIC3.52□□□□□ -1.85
SIX3O95343 RN7SKP156-201ENST00000410308 342 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX3O95343 SSXP9-201ENST00000417503 292 ntBASIC3.52□□□□□ -1.85
SIX3O95343 HMGB1P49-201ENST00000418882 569 ntBASIC3.52□□□□□ -1.85
SIX3O95343 YPEL5P1-201ENST00000419731 367 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AC245054.1-201ENST00000420944 258 ntBASIC3.52□□□□□ -1.85
SIX3O95343 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.52□□□□□ -1.85
SIX3O95343 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX3O95343 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX3O95343 AL953862.1-201ENST00000423016 168 ntBASIC3.52□□□□□ -1.85
SIX3O95343 MTCO1P39-201ENST00000426148 480 ntBASIC3.52□□□□□ -1.85
SIX3O95343 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX3O95343 MTCYBP34-201ENST00000439552 670 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AC002381.1-201ENST00000447049 280 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AC010655.1-201ENST00000449336 292 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX3O95343 RPL23AP35-201ENST00000451906 501 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.52□□□□□ -1.85
SIX3O95343 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX3O95343 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX3O95343 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX3O95343 DUXAP2-201ENST00000519198 589 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.52□□□□□ -1.85
SIX3O95343 AP006245.1-201ENST00000522549 120 ntBASIC3.52□□□□□ -1.85
SIX3O95343 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX3O95343 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX3O95343 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX3O95343 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.52□□□□□ -1.85
SIX3O95343 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX3O95343 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX3O95343 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX3O95343 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX3O95343 AC106900.2-201ENST00000604994 317 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX3O95343 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX3O95343 AP002826.1-201ENST00000608835 315 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AL357080.1-201ENST00000617394 239 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AL596245.1-201ENST00000618994 362 ntBASIC3.52□□□□□ -1.85
SIX3O95343 AP000484.1-201ENST00000620067 1252 ntBASIC3.52□□□□□ -1.85
SIX3O95343 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX3O95343 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms