Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLSTN1O94985 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLSTN1O94985 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
CLSTN1O94985 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.04□□□□□ -1.6
CLSTN1O94985 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.04□□□□□ -1.6
CLSTN1O94985 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLSTN1O94985 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLSTN1O94985 RNU5E-8P-201ENST00000363502 116 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 RNU6-432P-201ENST00000384196 109 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 RPS3AP24-201ENST00000407896 734 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.04□□□□□ -1.6
CLSTN1O94985 C1DP2-201ENST00000418167 426 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 Z74021.1-201ENST00000423610 407 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 USP9YP36-201ENST00000424581 829 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AC073614.1-201ENST00000438690 650 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.04□□□□□ -1.6
CLSTN1O94985 ARL2BPP10-201ENST00000446487 531 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 RPL12P20-201ENST00000475538 479 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AC021146.1-201ENST00000511202 716 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AC090151.1-201ENST00000520784 730 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 AL133153.1-201ENST00000557756 303 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 SNORD84-203ENST00000584275 78 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AC245517.5-201ENST00000611529 162 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 AC091834.1-201ENST00000614543 472 ntBASIC5.04□□□□□ -1.6
CLSTN1O94985 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.04□□□□□ -1.6
CLSTN1O94985 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLSTN1O94985 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.04□□□□□ -1.6
CLSTN1O94985 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CLSTN1O94985 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLSTN1O94985 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLSTN1O94985 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLSTN1O94985 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLSTN1O94985 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLSTN1O94985 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLSTN1O94985 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLSTN1O94985 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 MIR585-201ENST00000384887 94 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLSTN1O94985 AL590762.2-201ENST00000395798 571 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 RNA5SP129-201ENST00000410276 118 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 RN7SKP216-201ENST00000411050 312 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.03□□□□□ -1.6
CLSTN1O94985 MTCO1P21-201ENST00000416634 589 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 RPS15AP12-201ENST00000419498 388 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLSTN1O94985 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.03□□□□□ -1.6
CLSTN1O94985 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AC011825.1-201ENST00000484967 388 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.03□□□□□ -1.6
CLSTN1O94985 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AC010587.1-201ENST00000505809 469 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AC114797.1-201ENST00000514003 728 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 AC026801.2-201ENST00000515352 425 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.03□□□□□ -1.6
CLSTN1O94985 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AP000857.1-201ENST00000532151 543 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AL110118.1-201ENST00000553543 400 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 KC877982.1-201ENST00000602313 470 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.03□□□□□ -1.6
CLSTN1O94985 AL136313.1-201ENST00000624804 202 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 PISRT1-201ENST00000626175 531 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 U3.53-201ENST00000628922 216 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 AL392088.2-201ENST00000637607 285 ntBASIC5.03□□□□□ -1.6
CLSTN1O94985 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms