Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 COX6CP2-201ENST00000444980 225 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNQ3O43525 RNU7-136P-201ENST00000458819 69 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AC087312.1-201ENST00000471411 480 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AC084357.1-201ENST00000473404 255 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AL136126.1-201ENST00000473603 402 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNQ3O43525 AC090453.1-201ENST00000495560 436 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AC004069.2-201ENST00000505438 1114 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AC026427.2-201ENST00000506228 536 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 MTND4P2-201ENST00000507767 1203 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNQ3O43525 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNQ3O43525 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNQ3O43525 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.56□□□□□ -1.68
KCNQ3O43525 HSPA8P13-201ENST00000523715 472 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KCNQ3O43525 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNQ3O43525 PDCD5P1-201ENST00000543528 309 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.56□□□□□ -1.68
KCNQ3O43525 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNQ3O43525 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNQ3O43525 AC136618.2-201ENST00000575091 400 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 MIR4458-201ENST00000578872 75 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AP001004.1-201ENST00000582468 324 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNQ3O43525 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNQ3O43525 BNIP3P23-201ENST00000599655 511 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AL139395.1-201ENST00000603662 160 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AC025588.3-201ENST00000604182 274 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AL158196.1-201ENST00000616786 434 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNQ3O43525 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNQ3O43525 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.56□□□□□ -1.68
KCNQ3O43525 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KCNQ3O43525 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNQ3O43525 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNQ3O43525 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KCNQ3O43525 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNQ3O43525 AL355379.1-201ENST00000405542 640 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 MIR1250-201ENST00000408098 113 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.55□□□□□ -1.68
KCNQ3O43525 RPL21P109-201ENST00000422213 475 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AC010153.1-201ENST00000432862 727 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AL357520.1-201ENST00000441557 453 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 HSPE1P28-201ENST00000443139 211 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AC099563.1-201ENST00000456086 418 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNQ3O43525 RPL30P9-201ENST00000465586 330 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 PABPC1P3-201ENST00000469174 459 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AC087385.1-201ENST00000475062 312 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AC091435.1-201ENST00000505442 584 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AC109458.1-201ENST00000508858 316 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AC016065.2-201ENST00000514530 444 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 RNU2-27P-201ENST00000516185 142 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 RPL12P22-201ENST00000519073 490 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.55□□□□□ -1.68
KCNQ3O43525 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AC037471.2-201ENST00000564941 598 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AC067852.4-201ENST00000590314 478 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AC073544.2-201ENST00000601155 540 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 BBIP1P1-201ENST00000602999 279 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 AC009318.4-201ENST00000620496 486 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNQ3O43525 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNQ3O43525 AC027290.2-201ENST00000623210 18662 ntBASIC4.55□□□□□ -1.68
KCNQ3O43525 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNQ3O43525 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNQ3O43525 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
KCNQ3O43525 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNQ3O43525 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNQ3O43525 AL645937.1-201ENST00000641739 1652 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 MTND4P16-201ENST00000466108 1367 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 AL049555.1-201ENST00000562834 1933 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNQ3O43525 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCNQ3O43525 RPL23AP57-201ENST00000332361 466 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
KCNQ3O43525 RNU6-623P-201ENST00000363143 105 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 U3.4-201ENST00000363352 213 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 RNA5SP42-201ENST00000364278 115 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 SNORD82-201ENST00000365530 70 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 HSPE1P8-201ENST00000406997 288 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.54□□□□□ -1.68
KCNQ3O43525 AL353748.1-201ENST00000440753 474 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 RAP1BP2-201ENST00000478270 544 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.54□□□□□ -1.68
KCNQ3O43525 AC109486.1-201ENST00000486833 374 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 AC093663.1-201ENST00000497190 394 ntBASIC4.54□□□□□ -1.68
KCNQ3O43525 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms