Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 EI24P1-201ENST00000416584 867 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 COX6CP2-201ENST00000444980 225 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 RNA5SP200-201ENST00000516360 103 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 HIGD1AP10-201ENST00000527837 282 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AC025281.1-201ENST00000567026 265 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 FAM60CP-201ENST00000591086 664 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AC026241.1-201ENST00000517873 2142 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 RNA5SP456-201ENST00000364002 114 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AC093151.1-201ENST00000427711 313 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 ARL2BPP2-201ENST00000550907 489 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 CBX3P5-201ENST00000552017 521 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 AC108479.2-201ENST00000617314 601 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RAD1P1-201ENST00000231383 813 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RNU1-51P-201ENST00000365345 176 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 SNORA48.3-201ENST00000391081 134 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RNU2-17P-201ENST00000410290 190 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RPL31P53-201ENST00000457065 348 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC092185.1-201ENST00000491371 97 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC092436.3-201ENST00000511788 257 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC115989.2-201ENST00000578640 563 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 MIR3199-1-201ENST00000582434 88 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC107871.2-201ENST00000612894 502 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC107905.1-201ENST00000616204 426 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC002076.2-201ENST00000617362 122 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 U8.10-201ENST00000384260 133 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RPL21P75-201ENST00000396599 483 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RPL21P1-201ENST00000399532 476 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RPL21P28-201ENST00000401418 483 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AL592114.1-201ENST00000403842 483 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RAB9AP5-201ENST00000437794 597 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RAB9AP2-201ENST00000443911 597 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC090543.1-201ENST00000492168 485 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 RPL21P16-201ENST00000495531 483 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 OR52A4P-203ENST00000498233 1014 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 POU5F1P7-201ENST00000508759 541 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 USP9YP5-201ENST00000511770 630 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC008676.3-201ENST00000521237 435 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 OR7K1P-201ENST00000546439 926 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AL121839.1-201ENST00000556233 1185 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 VN1R81P-201ENST00000602085 372 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC006254.3-201ENST00000603353 884 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC012531.5-201ENST00000611375 151 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 MIR6504-201ENST00000613520 61 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 AC067852.7-201ENST00000623270 535 ntBASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A6A6NMZ7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 RNU6-1331P-201ENST00000363658 106 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 AL139156.1-201ENST00000412785 841 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 AL356806.1-201ENST00000422524 916 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 UBE2V2P3-201ENST00000433562 437 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 AL163540.1-201ENST00000485382 386 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms