Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 RPL23AP76-201ENST00000441860 458 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AC011611.5-201ENST00000552477 578 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AC090953.1-201ENST00000604305 1092 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AL135786.2-201ENST00000608422 615 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AC244517.12-201ENST00000623581 663 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AC048347.1-201ENST00000624621 427 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 RNU6-603P-201ENST00000411403 107 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 TAF9P1-201ENST00000445421 515 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 TAF9P2-201ENST00000454958 515 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 CCNHP1-201ENST00000513311 678 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 HMGB1P41-201ENST00000520234 440 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 MIR4512-201ENST00000583257 77 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 AL451074.6-201ENST00000608512 729 ntBASIC2.72□□□□□ -1.97
RGPD3A6NKT7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RGPD3A6NKT7 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.71□□□□□ -1.98
RGPD3A6NKT7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RGPD3A6NKT7 SNORD21-201ENST00000383953 95 ntBASIC2.71□□□□□ -1.98
RGPD3A6NKT7 SNORA67.3-201ENST00000384366 140 ntBASIC2.71□□□□□ -1.98
RGPD3A6NKT7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RGPD3A6NKT7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.71□□□□□ -1.98
RGPD3A6NKT7 AL138787.1-202ENST00000437804 898 ntBASIC2.71□□□□□ -1.98
RGPD3A6NKT7 AL049830.2-201ENST00000480072 201 ntBASIC2.71□□□□□ -1.98
RGPD3A6NKT7 AC140059.1-201ENST00000489238 361 ntBASIC2.71□□□□□ -1.98
RGPD3A6NKT7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.71□□□□□ -1.98
RGPD3A6NKT7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.71□□□□□ -1.98
RGPD3A6NKT7 CFTRP2-201ENST00000634304 199 ntBASIC2.71□□□□□ -1.98
RGPD3A6NKT7 CU459211.1-201ENST00000635667 749 ntBASIC2.71□□□□□ -1.98
RGPD3A6NKT7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.71□□□□□ -1.98
RGPD3A6NKT7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.7□□□□□ -1.98
RGPD3A6NKT7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
RGPD3A6NKT7 DEFA7P-201ENST00000382676 285 ntBASIC2.7□□□□□ -1.98
RGPD3A6NKT7 MIR124-3-201ENST00000384866 87 ntBASIC2.7□□□□□ -1.98
RGPD3A6NKT7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.7□□□□□ -1.98
RGPD3A6NKT7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.7□□□□□ -1.98
RGPD3A6NKT7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.7□□□□□ -1.98
RGPD3A6NKT7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.7□□□□□ -1.98
RGPD3A6NKT7 IGHV3-76-201ENST00000522465 295 ntBASIC2.7□□□□□ -1.98
RGPD3A6NKT7 AC123786.2-201ENST00000603459 275 ntBASIC2.7□□□□□ -1.98
RGPD3A6NKT7 AC010680.1-201ENST00000590024 3590 ntBASIC2.7□□□□□ -1.98
RGPD3A6NKT7 AF127577.6-201ENST00000623352 2191 ntBASIC2.7□□□□□ -1.98
RGPD3A6NKT7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.7□□□□□ -1.98
RGPD3A6NKT7 AL109809.4-201ENST00000603520 2185 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 MIR6073-201ENST00000352083 89 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AL354719.1-201ENST00000406535 843 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 YWHAZP7-201ENST00000436906 631 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AC008571.1-201ENST00000467232 300 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AC110588.1-201ENST00000559699 137 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 SUB1P3-201ENST00000564581 315 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AC005951.1-201ENST00000576706 485 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 SNORD39.2-201ENST00000579995 76 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AP000275.1-201ENST00000411943 390 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 CLIC4P1-201ENST00000453177 535 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AP003385.6-201ENST00000531603 374 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 MIR3683-201ENST00000580847 82 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AC002064.3-201ENST00000623448 346 ntBASIC2.69□□□□□ -1.98
RGPD3A6NKT7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.69□□□□□ -1.98
RGPD3A6NKT7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RGPD3A6NKT7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.68□□□□□ -1.98
RGPD3A6NKT7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.68□□□□□ -1.98
RGPD3A6NKT7 AC022431.1-201ENST00000450941 438 ntBASIC2.68□□□□□ -1.98
RGPD3A6NKT7 HMGB3P21-201ENST00000452483 547 ntBASIC2.68□□□□□ -1.98
RGPD3A6NKT7 AP000705.1-201ENST00000454567 350 ntBASIC2.68□□□□□ -1.98
RGPD3A6NKT7 AC233279.1-201ENST00000455300 423 ntBASIC2.68□□□□□ -1.98
RGPD3A6NKT7 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
RGPD3A6NKT7 AL645944.1-201ENST00000603857 493 ntBASIC2.68□□□□□ -1.98
RGPD3A6NKT7 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
RGPD3A6NKT7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RGPD3A6NKT7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RGPD3A6NKT7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.67□□□□□ -1.98
RGPD3A6NKT7 TVP23BP2-201ENST00000455082 615 ntBASIC2.67□□□□□ -1.98
RGPD3A6NKT7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms