Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC092447.3-201ENST00000426027 686 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC097713.2-201ENST00000430199 356 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 CR769776.1-201ENST00000441254 787 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 RPS12P18-201ENST00000442381 270 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 MTCYBP42-201ENST00000444653 1130 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 CYCSP35-201ENST00000451978 304 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 RPS27P29-201ENST00000463110 252 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 ST13P14-201ENST00000474095 734 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 TXNP6-201ENST00000510190 310 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 RNA5SP135-201ENST00000517019 125 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC037471.2-201ENST00000564941 598 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 SNORD39.3-201ENST00000584451 71 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 VN1R78P-201ENST00000597393 564 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AL591516.1-201ENST00000611326 274 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 MIR8058-201ENST00000615737 89 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC015967.1-201ENST00000619893 476 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AL512506.2-201ENST00000624472 458 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AP000676.4-201ENST00000624659 623 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 U6.105-201ENST00000637379 88 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC099786.3-201ENST00000565735 1410 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 RNU6-707P-201ENST00000364647 95 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 RNU6-730P-201ENST00000383954 104 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 SNORA40.2-201ENST00000390847 128 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 MTCO1P56-201ENST00000401674 224 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 MTCO2P21-201ENST00000419780 677 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC005300.1-201ENST00000428401 373 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 FTH1P1-201ENST00000437933 532 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 EEF1A1P39-201ENST00000440791 250 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 HMGB3P6-201ENST00000444896 598 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 PTENP1-201ENST00000447117 1215 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 PRDX3P3-201ENST00000447765 522 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 RPS20P24-201ENST00000457473 361 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AL136126.1-201ENST00000473603 402 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 RPL21P131-201ENST00000497298 483 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC245166.1-201ENST00000521012 253 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 DEFB130C-202ENST00000530001 230 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC044913.1-201ENST00000557200 430 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC093519.1-201ENST00000566109 298 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 MIR5708-201ENST00000579723 85 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 SNORD84-203ENST00000584275 78 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AP001542.2-201ENST00000593141 364 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC022146.1-201ENST00000595307 847 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 CKS1BP3-201ENST00000600888 237 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AC022022.2-201ENST00000602989 360 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 SRGNP1-201ENST00000603392 451 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 AL592148.2-201ENST00000612210 372 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 MTCO1P12-201ENST00000414273 1543 ntBASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM49BA6NDI0 ZNF876P-202ENST00000398732 1485 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 RNU4-51P-201ENST00000364206 140 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 RNU6-636P-201ENST00000384598 107 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 MIR591-201ENST00000385290 95 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms