Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RPL23AP62-201ENST00000463396 453 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 LINC00888-204ENST00000487386 421 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.03□□□□□ -2.08
CNOT1A5YKK6 MTCYBP20-201ENST00000524239 1129 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC005730.3-201ENST00000583067 366 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AL356280.1-201ENST00000603614 379 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 CU459211.1-201ENST00000635667 749 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC093536.2-201ENST00000565257 1406 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 RPL9P33-201ENST00000484311 566 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 OR52A4P-203ENST00000498233 1014 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 XPOTP1-201ENST00000443317 2398 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 RNA5SP129-201ENST00000410276 118 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AL034379.1-201ENST00000423216 253 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC011352.3-201ENST00000505162 593 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 MIR4255-201ENST00000579351 72 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 RPAP2P1-201ENST00000603626 1168 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC009501.3-201ENST00000605001 1352 ntBASIC2.02□□□□□ -2.09
CNOT1A5YKK6 AC007336.1-201ENST00000576365 3828 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 MIR9-3-201ENST00000385084 90 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AC233279.1-201ENST00000455300 423 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 SNRPFP4-201ENST00000456366 242 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 RPL23AP14-201ENST00000468281 468 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 RNA5SP200-201ENST00000516360 103 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AC025881.1-201ENST00000518851 512 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AP005660.1-201ENST00000522972 293 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 HIGD1AP10-201ENST00000527837 282 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 MIR4303-201ENST00000581299 66 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 RNA5SP456-201ENST00000364002 114 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 Y_RNA.354-201ENST00000365448 111 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AC239798.3-201ENST00000454459 408 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AC117532.1-201ENST00000514638 323 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 LRRC37A5P-203ENST00000580181 585 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AC022709.1-201ENST00000615967 87 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CNOT1A5YKK6 AC010872.1-201ENST00000624225 675 ntBASIC2.01□□□□□ -2.09
CNOT1A5YKK6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CNOT1A5YKK6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CNOT1A5YKK6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CNOT1A5YKK6 U8.10-201ENST00000384260 133 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 AL021407.1-201ENST00000404531 386 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2□□□□□ -2.09
CNOT1A5YKK6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2□□□□□ -2.09
CNOT1A5YKK6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2□□□□□ -2.09
CNOT1A5YKK6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2□□□□□ -2.09
CNOT1A5YKK6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2□□□□□ -2.09
CNOT1A5YKK6 MIR7973-1-201ENST00000614683 76 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2□□□□□ -2.09
CNOT1A5YKK6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2□□□□□ -2.09
CNOT1A5YKK6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2□□□□□ -2.09
CNOT1A5YKK6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2□□□□□ -2.09
CNOT1A5YKK6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2□□□□□ -2.09
CNOT1A5YKK6 AC092427.1-202ENST00000430569 476 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 AL353093.1-201ENST00000441292 436 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2□□□□□ -2.09
CNOT1A5YKK6 MTND4LP12-201ENST00000448237 295 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 AL137159.1-201ENST00000452808 512 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2□□□□□ -2.09
CNOT1A5YKK6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2□□□□□ -2.09
CNOT1A5YKK6 SNORA70.14-201ENST00000516205 110 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2□□□□□ -2.09
CNOT1A5YKK6 OR4H12P-201ENST00000556269 907 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 CD24P2-201ENST00000565486 219 ntBASIC2□□□□□ -2.09
CNOT1A5YKK6 ZNF542P-204ENST00000482727 1305 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 MTND5P12-201ENST00000502851 1449 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 RNU1-57P-201ENST00000384491 166 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 EI24P1-201ENST00000416584 867 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms