Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 ST13P14-201ENST00000474095 734 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC006517.1-201ENST00000480485 328 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 OR4P1P-201ENST00000530808 1136 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AP000907.2-201ENST00000530827 353 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC099489.2-201ENST00000574976 260 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC068790.3-201ENST00000602988 553 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC012603.1-201ENST00000606424 528 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 MIR6748-201ENST00000610433 71 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AL161616.1-201ENST00000611867 286 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 MIR7702-201ENST00000621931 59 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC091953.2-201ENST00000623979 160 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC008013.2-202ENST00000637965 364 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 AC024560.2-201ENST00000507981 1497 ntBASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PCDHA3Q9Y5H8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
PCDHA3Q9Y5H8 AL356489.2-201ENST00000566968 3528 ntBASIC4.46□□□□□ -1.69
PCDHA3Q9Y5H8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC012618.3-205ENST00000637896 1496 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 Y_RNA.554-201ENST00000384672 102 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL356387.2-201ENST00000422272 243 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 RPEP3-201ENST00000425462 676 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 MRPS10P2-201ENST00000431226 381 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL358934.1-201ENST00000432346 324 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL136380.1-201ENST00000447970 162 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 MTCO3P20-201ENST00000454926 688 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 RPL23AP81-201ENST00000455252 467 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 snoU13.3-201ENST00000459441 104 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 RPS26P15-201ENST00000488067 348 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL139099.1-201ENST00000497398 403 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC139783.2-201ENST00000504847 1145 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC002456.2-201ENST00000509356 380 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 SAP18P1-201ENST00000512058 390 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC010493.1-201ENST00000513479 292 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC107934.1-201ENST00000522215 217 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 MTCYBP41-201ENST00000528913 1123 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC107954.1-201ENST00000565906 727 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL606834.2-201ENST00000602954 668 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC011451.2-201ENST00000604303 598 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL732618.1-201ENST00000623251 301 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 MIR6715B-201ENST00000637172 77 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 AL133243.3-201ENST00000617415 3004 ntBASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHA3Q9Y5H8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC079741.1-201ENST00000321498 212 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 RNU4-1-201ENST00000363925 141 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 SNORA37-201ENST00000384504 129 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 RNA5SP306-201ENST00000411087 107 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 MTND1P23-201ENST00000416931 372 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC004552.1-201ENST00000419089 348 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AL157831.1-201ENST00000426134 473 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms