Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC022364.2-201ENST00000457963 554 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 AC079382.1-201ENST00000493346 557 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 RN7SKP122-201ENST00000515923 296 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 OR4T1P-201ENST00000554933 911 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 AL049839.1-201ENST00000556151 657 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 FRG1KP-201ENST00000623592 341 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 NOL8P1-201ENST00000508336 3529 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 DDX10P1-201ENST00000448545 1933 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AL391684.1-202ENST00000641293 1636 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AL672167.1-203ENST00000641299 2975 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AL442639.1-201ENST00000625030 1899 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 Y_RNA.1-201ENST00000352915 104 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RNU6-181P-201ENST00000363225 107 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RNU4-1-201ENST00000363925 141 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RNY3P13-201ENST00000365542 102 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 SNORD3H-201ENST00000384486 214 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 Y_RNA.548-201ENST00000384656 105 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 SNORD96B-201ENST00000386148 79 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 CIR1P3-201ENST00000405137 479 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RN7SKP267-201ENST00000410381 285 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC009237.10-201ENST00000414112 510 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AL645608.4-201ENST00000423619 154 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 EIF4HP2-201ENST00000424380 563 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RWDD4P2-201ENST00000426392 563 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 MTCO2P11-201ENST00000431069 680 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AL451074.3-201ENST00000437709 472 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC079781.2-201ENST00000446424 169 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 ARL2BPP10-201ENST00000446487 531 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 FABP3P2-201ENST00000453169 399 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RPL36AP13-201ENST00000457490 317 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC103987.1-201ENST00000473394 348 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RN7SL558P-201ENST00000497468 299 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RNU2-10P-201ENST00000516375 211 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RNU6-445P-201ENST00000516949 107 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RNA5SP337-201ENST00000517007 109 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 FAM92A1P1-201ENST00000528023 890 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 MIR3167-201ENST00000579623 85 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 RPL12P25-202ENST00000598100 674 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 BNIP3P33-201ENST00000598912 569 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC012507.3-201ENST00000603556 477 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 MLECP1-201ENST00000615893 709 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 MAPK10-303ENST00000641324 3959 ntBASIC4.54□□□□□ -1.68
PCDHGA3Q9Y5H0 AC139713.2-214ENST00000642059 1811 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 U3.11-201ENST00000364476 212 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 Y_RNA.372-201ENST00000365599 102 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL109755.1-201ENST00000401791 649 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 RN7SKP285-201ENST00000410137 318 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms