Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AC009314.1-201ENST00000603871 304 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AL137790.1-201ENST00000634283 177 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AL359851.1-201ENST00000569460 4997 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 MIR320B1-201ENST00000390209 79 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AC063976.3-201ENST00000426849 329 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AL451074.3-201ENST00000437709 472 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AC000041.1-201ENST00000439655 175 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 RPS26P56-201ENST00000444468 240 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AP002345.1-201ENST00000456493 928 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AC080014.1-201ENST00000496877 1201 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 MTND3P24-201ENST00000506306 329 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 RNA5SP200-201ENST00000516360 103 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AC026241.1-201ENST00000517873 2142 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AL391834.1-201ENST00000609609 560 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AC008083.4-201ENST00000615076 444 ntBASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
AP4S1Q9Y587 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2□□□□□ -2.09
AP4S1Q9Y587 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2□□□□□ -2.09
AP4S1Q9Y587 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
AP4S1Q9Y587 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
AP4S1Q9Y587 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2□□□□□ -2.09
AP4S1Q9Y587 MIR221-201ENST00000385135 110 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 RPL26P37-201ENST00000411983 438 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2□□□□□ -2.09
AP4S1Q9Y587 AC107081.1-201ENST00000414975 361 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 RABEPKP1-201ENST00000440529 1026 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 AL121871.1-201ENST00000443413 436 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2□□□□□ -2.09
AP4S1Q9Y587 AC010301.1-201ENST00000473936 355 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2□□□□□ -2.09
AP4S1Q9Y587 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2□□□□□ -2.09
AP4S1Q9Y587 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
AP4S1Q9Y587 AL035413.2-201ENST00000604801 525 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2□□□□□ -2.09
AP4S1Q9Y587 NF1P10-201ENST00000613227 742 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 CR392039.4-201ENST00000624968 501 ntBASIC2□□□□□ -2.09
AP4S1Q9Y587 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 OR5J1P-201ENST00000313544 939 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 SNORA6-201ENST00000384033 151 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AL590290.1-201ENST00000405336 380 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AC092427.1-202ENST00000430569 476 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 RPS23P3-201ENST00000470993 430 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 RNA5SP468-201ENST00000516782 93 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AC019227.1-201ENST00000526902 510 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AC109635.4-202ENST00000531666 412 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 SRGNP1-201ENST00000603392 451 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 AL592494.3-201ENST00000609485 464 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.99□□□□□ -2.09
AP4S1Q9Y587 CENPCP1-201ENST00000533085 2578 ntBASIC1.99□□□□□ -2.09
AP4S1Q9Y587 RNU6-50P-201ENST00000362356 103 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 RNA5SP38-201ENST00000410750 119 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 RPL17P12-201ENST00000413391 526 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 HMGB1P22-201ENST00000505315 124 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 RPL7P20-201ENST00000520308 745 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AC022690.1-201ENST00000526681 550 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 MIR4444-1-201ENST00000581696 74 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 MIR4444-2-201ENST00000584390 74 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 NUTF2P8-201ENST00000604593 363 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AL137843.1-201ENST00000605078 385 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms