Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 GLRXP1-201ENST00000423261 334 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 Z80107.1-201ENST00000436830 412 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 MTND4P6-201ENST00000438297 472 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC092641.1-201ENST00000440229 772 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 HMGB1P15-201ENST00000453854 435 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC004801.2-202ENST00000463559 283 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 MTND1P16-201ENST00000465177 898 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC087312.1-201ENST00000471411 480 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AP000563.1-201ENST00000490865 758 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 MTCYBP17-201ENST00000503579 789 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC020699.1-201ENST00000505161 445 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC006390.1-201ENST00000508068 283 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 RNU6-1095P-201ENST00000516148 108 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 RNY4P37-201ENST00000516225 96 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 MAGOH2P-202ENST00000584384 429 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AL365503.1-201ENST00000605247 905 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC109809.1-201ENST00000619665 545 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC012314.7-201ENST00000619693 93 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC018755.4-201ENST00000619715 454 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC244100.1-202ENST00000621554 382 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AL357559.1-201ENST00000622228 274 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC244258.1-201ENST00000637553 1071 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AL392088.2-201ENST00000637607 285 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC097714.1-201ENST00000511272 1647 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AL136164.4-201ENST00000625013 2135 ntBASIC3.28□□□□□ -1.89
ATG4BQ9Y4P1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.28□□□□□ -1.89
ATG4BQ9Y4P1 MFSD8-233ENST00000641482 4860 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 SNORA63.1-201ENST00000362493 131 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 DEFB109C-201ENST00000382575 264 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 DEFB109B-201ENST00000382656 264 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 ANAPC10P1-201ENST00000395991 556 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RNA5SP129-201ENST00000410276 118 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RNA5SP44-201ENST00000410446 133 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RPL7P30-201ENST00000420888 709 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 USP9YP11-201ENST00000427537 717 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 SETP5-201ENST00000437270 562 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 OFD1P3Y-201ENST00000453312 783 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RPL21P134-201ENST00000453468 483 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RBMY2UP-201ENST00000453474 324 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 NECAP1P2-201ENST00000455668 727 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 BTF3P5-201ENST00000457252 467 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC078785.3-201ENST00000476607 425 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC025518.1-201ENST00000479856 347 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RN7SL293P-201ENST00000481765 281 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC091951.3-201ENST00000504093 246 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 PCBP2P3-201ENST00000509726 843 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC004062.1-201ENST00000509926 645 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC116353.3-201ENST00000511215 249 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC105914.1-201ENST00000511798 226 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RNU1-61P-201ENST00000516107 151 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 SNORA70.19-201ENST00000516717 90 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 SYF2P1-201ENST00000550658 413 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 MIR3944-201ENST00000581277 108 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC091057.2-201ENST00000602594 792 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC006254.3-201ENST00000603353 884 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC069200.1-201ENST00000609511 323 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AL592295.2-201ENST00000612578 206 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC084757.4-201ENST00000616350 526 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC004009.2-201ENST00000623016 728 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC004777.1-201ENST00000624317 287 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.27□□□□□ -1.89
ATG4BQ9Y4P1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms