Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL138960.2-201ENST00000625145 535 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 AC013437.2-201ENST00000639587 677 ntBASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
KCNIP3Q9Y2W7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
KCNIP3Q9Y2W7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AL353743.1-202ENST00000431724 1695 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 SNORA58B-201ENST00000364259 136 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 MIR135A2-201ENST00000384854 100 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 DHFRP6-201ENST00000401776 268 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 HMGB1P17-201ENST00000403495 628 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AL356131.1-201ENST00000405826 414 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AL592310.1-201ENST00000414330 671 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 RPL7P10-201ENST00000417407 739 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 BEND7P1-201ENST00000422058 457 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 OR6K1P-201ENST00000456766 971 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 SNORD105B-201ENST00000458770 79 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC023424.2-201ENST00000493479 777 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC096571.1-202ENST00000506634 735 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC091163.3-201ENST00000518269 1144 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC051619.2-201ENST00000559063 397 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC055876.1-202ENST00000567053 138 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 MTND3P13-201ENST00000574391 343 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AL627309.6-201ENST00000606857 840 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AF129408.1-201ENST00000608767 431 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AC092447.7-201ENST00000422212 1621 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 CR383658.2-201ENST00000547576 1525 ntBASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
KCNIP3Q9Y2W7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC108206.1-201ENST00000570186 4159 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 CUL1P1-201ENST00000509510 2425 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 SNORD9-201ENST00000362566 104 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 U3.6-201ENST00000363622 211 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RPS3AP26-201ENST00000398259 784 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RNA5SP317-201ENST00000410176 116 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RN7SKP156-201ENST00000410308 342 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RNA5SP311-201ENST00000411290 116 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 MTATP6P27-201ENST00000416987 621 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 SSXP9-201ENST00000417503 292 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 MTATP6P4-201ENST00000427725 675 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC109583.1-201ENST00000432156 268 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RAC1P7-201ENST00000445367 377 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 HSFY6P-201ENST00000445573 403 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AL358794.1-201ENST00000445689 381 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RNA5SP310-201ENST00000459084 116 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RN7SL459P-201ENST00000481078 302 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC098799.2-201ENST00000509466 868 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RNA5SP315-201ENST00000516340 116 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 SNORA70.16-201ENST00000516390 95 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 SNORD59.2-201ENST00000516873 68 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RNA5SP312-201ENST00000517068 116 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RNU6-711P-201ENST00000517255 106 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AP001207.2-201ENST00000519490 539 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 FAM60DP-201ENST00000524174 632 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AP001804.3-201ENST00000525146 880 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC005832.3-201ENST00000537929 631 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC090912.3-201ENST00000609775 533 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AC005962.2-201ENST00000611427 652 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 AL596245.1-201ENST00000618994 362 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms