Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.126-201ENST00000363382 111 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.153-201ENST00000363615 91 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RNU6-593P-201ENST00000364716 112 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 SNORA24.1-201ENST00000384401 135 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 MIR450B-201ENST00000401182 78 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RNU4-46P-201ENST00000410818 138 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 E2F6P2-201ENST00000420708 748 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RPL12P34-201ENST00000424532 479 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RPL7P46-201ENST00000425129 740 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AL031736.2-201ENST00000426573 787 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 BX276092.6-201ENST00000430476 250 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 SNAP23P1-201ENST00000433229 246 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RPS24P13-201ENST00000442520 397 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AL162388.1-201ENST00000450912 352 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 BX276092.8-201ENST00000455722 250 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 SLC25A15P5-201ENST00000508033 253 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 HIGD1AP13-201ENST00000509878 289 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 TBCAP3-201ENST00000512475 312 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AL133271.1-201ENST00000538229 291 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 OR11H5P-201ENST00000554039 926 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC106782.4-201ENST00000568264 210 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RN7SL802P-201ENST00000577858 299 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC091042.1-201ENST00000579213 173 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC113195.1-201ENST00000579952 141 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AL512605.2-201ENST00000592972 256 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RNA5SP439-201ENST00000617595 124 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC090971.4-201ENST00000560291 1800 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.307-201ENST00000365022 117 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 DEFB109C-201ENST00000382575 264 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 DEFB109B-201ENST00000382656 264 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.389-201ENST00000383924 113 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.556-201ENST00000384677 113 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 NDUFS5P1-201ENST00000405668 289 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 AC006967.1-201ENST00000467608 589 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 ATP1B3P1-201ENST00000605365 821 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 AC009229.3-201ENST00000608056 282 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 U2.1-201ENST00000618978 145 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 AL445363.3-201ENST00000623080 671 ntBASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
ZC3H4Q9UPT8 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 RNU6-562P-201ENST00000362731 107 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 SNORD3E-201ENST00000362899 217 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 RN7SKP227-201ENST00000364445 330 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.473-201ENST00000384333 102 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 GLULP6-201ENST00000399502 913 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 RNU2-15P-201ENST00000410692 191 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AL358176.3-201ENST00000420757 454 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AC073410.1-201ENST00000435125 589 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms