Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AC068790.2-201ENST00000602601 557 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 RNU6-88P-201ENST00000606801 100 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AC090425.2-201ENST00000608818 501 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL158196.1-201ENST00000616786 434 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 U73479.1-201ENST00000618062 168 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 AL356596.1-201ENST00000624230 379 ntBASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC9Q9UKV0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC093908.1-201ENST00000623125 8092 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 RNU6-1226P-201ENST00000384317 107 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 Y_RNA.553-201ENST00000384670 102 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 CYCSP46-201ENST00000423569 204 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 HLA-N-201ENST00000437516 135 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 EPS15P1-201ENST00000448836 336 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 TRBV26-201ENST00000456572 344 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC114981.1-201ENST00000503897 678 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 MTND4P2-201ENST00000507767 1203 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC008127.2-201ENST00000549925 1075 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 LSM6P2-201ENST00000552208 177 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 HSPE1P3-201ENST00000559254 309 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL133457.1-201ENST00000564251 987 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC005951.1-201ENST00000576706 485 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 OR4G1P-201ENST00000588632 938 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC119751.7-201ENST00000600494 245 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 U73023.1-201ENST00000603134 700 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL009028.1-201ENST00000604895 802 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 U6.101-201ENST00000637707 76 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AC092104.1-201ENST00000497346 1441 ntBASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
HDAC9Q9UKV0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 CR383658.2-201ENST00000547576 1525 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 RNA5SP502-201ENST00000362694 119 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AL121972.1-201ENST00000402023 252 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 EI24P1-201ENST00000416584 867 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 RPL7P30-201ENST00000420888 709 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AL512649.1-201ENST00000428997 581 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 DLGAP5P1-201ENST00000430307 464 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AL512286.1-201ENST00000439244 400 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 COX6CP2-201ENST00000444980 225 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AC104073.1-201ENST00000451988 151 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AC133473.1-201ENST00000455173 299 ntBASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC9Q9UKV0 AL049873.1-201ENST00000480540 376 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms