Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AL731532.1-201ENST00000623972 4236 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 Y_RNA.153-201ENST00000363615 91 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 SET-203ENST00000372688 801 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 RPL7AP73-201ENST00000413490 353 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AL138785.1-201ENST00000425821 331 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 BX323845.3-201ENST00000428215 527 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 USP9YP30-201ENST00000430729 455 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC099799.1-201ENST00000439809 192 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 CECR9-201ENST00000453421 199 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AP000926.1-201ENST00000479573 241 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC090686.1-201ENST00000481577 749 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 RN7SL629P-201ENST00000489622 285 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 RNU6-635P-201ENST00000516651 102 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 RNU6-1271P-201ENST00000517049 105 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 RNU6-840P-201ENST00000517275 65 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 ERHP1-201ENST00000523006 310 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 TXNP4-201ENST00000575018 310 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC100812.1-201ENST00000607622 580 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AL442067.1-201ENST00000613261 223 ntBASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXD3Q9UJU5 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
FOXD3Q9UJU5 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
FOXD3Q9UJU5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
FOXD3Q9UJU5 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
FOXD3Q9UJU5 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
FOXD3Q9UJU5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.21□□□□□ -1.57
FOXD3Q9UJU5 AP002512.4-202ENST00000641599 4530 ntBASIC5.21□□□□□ -1.57
FOXD3Q9UJU5 Y_RNA.2-201ENST00000362330 96 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 RNU6-306P-201ENST00000384617 107 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 Y_RNA.645-201ENST00000391229 102 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AL133388.1-201ENST00000404509 287 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 SNORA11B-201ENST00000408175 129 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 RNU6-55P-201ENST00000411092 107 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 BMS1P17-202ENST00000416720 316 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 DPH3P2-201ENST00000422618 250 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 MRPS21P2-201ENST00000424704 264 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AC097713.2-201ENST00000430199 356 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 HMGB1P27-201ENST00000431429 603 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 RPL21P41-201ENST00000459863 264 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 RN7SL466P-201ENST00000497546 295 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 MRPS33P2-201ENST00000507850 322 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 MIR2117-201ENST00000516780 80 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AC008694.2-201ENST00000517591 306 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 MIR4505-201ENST00000582238 73 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 MIR4443-201ENST00000585052 53 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 FO393422.1-201ENST00000603908 708 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AC104695.3-201ENST00000604052 296 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AP005431.1-201ENST00000618479 319 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 AC007938.2-201ENST00000604666 2634 ntBASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms