Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-55P-201ENST00000411092 107 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 RNU6-954P-201ENST00000411355 107 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 VN1R51P-201ENST00000411675 945 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 OR4K6P-201ENST00000416478 897 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 Z75741.2-201ENST00000417272 1167 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 TOMM22P1-201ENST00000418578 312 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AL358794.1-201ENST00000445689 381 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 MTATP6P14-201ENST00000455189 673 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC096571.1-202ENST00000506634 735 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 RNU6-1261P-201ENST00000517194 104 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC091163.3-201ENST00000518269 1144 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 IGHV3-76-201ENST00000522465 295 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC109635.4-202ENST00000531666 412 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC011816.2-201ENST00000607089 556 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC006329.2-201ENST00000611491 394 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC010975.3-201ENST00000618727 978 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC018816.2-201ENST00000621460 353 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC009269.6-201ENST00000621778 588 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 AC048347.1-201ENST00000624621 427 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 MKKS-204ENST00000639674 192 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 NUP58P1-201ENST00000502546 1738 ntBASIC2.84□□□□□ -1.96
CLCF1Q9UBD9 AF127577.6-201ENST00000623352 2191 ntBASIC2.84□□□□□ -1.96
CLCF1Q9UBD9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
CLCF1Q9UBD9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 Y_RNA.25-201ENST00000362528 102 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 RNU6-1249P-201ENST00000363237 111 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 RNU6-657P-201ENST00000383904 107 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 RNU6-629P-201ENST00000384061 103 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 MIR506-201ENST00000384998 124 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 LUZP4P1-201ENST00000415420 344 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC007435.1-201ENST00000421086 415 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 RPL23AP69-201ENST00000431134 458 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 MRPS31P2-201ENST00000451581 518 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AP002884.2-201ENST00000471647 395 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC087808.1-201ENST00000520501 361 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC138915.2-201ENST00000569776 97 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC006539.2-201ENST00000601729 572 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC069431.2-201ENST00000604149 1099 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AP001521.1-201ENST00000609150 300 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC006023.2-201ENST00000609916 167 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AL590282.1-201ENST00000610379 1136 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC099778.2-201ENST00000610904 211 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 PART1_2.1-201ENST00000612397 250 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC005332.6-201ENST00000613178 446 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC100793.4-201ENST00000613683 429 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC022306.3-201ENST00000619930 550 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC084824.4-201ENST00000620106 731 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC006963.1-201ENST00000624003 1052 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 CYP3A51P-201ENST00000633513 256 ntBASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLCF1Q9UBD9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC004925.1-201ENST00000624256 2706 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 RPL23AP57-201ENST00000332361 466 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 snoZ40.1-201ENST00000364540 72 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 AC016769.3-201ENST00000396562 315 ntBASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLCF1Q9UBD9 MTCO3P12-201ENST00000416718 547 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms