Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MTND2P19-201ENST00000449129 1012 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 TRBV26-201ENST00000456572 344 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AL031183.1-201ENST00000457667 207 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 NAP1L1P3-201ENST00000462291 880 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 RPL27AP5-201ENST00000469428 449 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 RN7SL601P-201ENST00000471221 293 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 RPL30P14-201ENST00000482744 348 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 PRELID3BP4-201ENST00000515476 571 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 SNORA9.3-201ENST00000516383 129 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 PSMA2P1-201ENST00000526365 646 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AP000790.1-201ENST00000528891 737 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC018630.1-201ENST00000541376 925 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC107016.2-201ENST00000547968 190 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 NIFKP8-201ENST00000560500 874 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC053481.3-201ENST00000577881 843 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC096947.1-201ENST00000603233 470 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 BNIP3P11-201ENST00000603878 563 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC124312.4-201ENST00000605533 310 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 RPL23AP88-201ENST00000605759 454 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC106028.5-201ENST00000610332 395 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC009318.4-201ENST00000620496 486 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AL049780.3-201ENST00000624612 1583 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC009487.2-201ENST00000420969 6821 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AC233263.6-201ENST00000631132 1963 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AC099677.1-201ENST00000420575 175 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AL158156.1-201ENST00000422509 473 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 RPS4XP6-201ENST00000477670 797 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 RPS3AP43-201ENST00000479743 781 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AC109471.1-201ENST00000511631 612 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AC009812.2-201ENST00000517657 457 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 HPRT1P3-201ENST00000539521 576 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AADACP1-206ENST00000561502 1193 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 KATNBL1P5-201ENST00000605015 517 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 MIR6076-201ENST00000617521 113 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AL731566.2-201ENST00000618971 317 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AC034229.5-201ENST00000624258 185 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VAPAQ9P0L0 CUL1P1-201ENST00000509510 2425 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 AC008432.1-201ENST00000615912 1320 ntBASIC2.67□□□□□ -1.98
VAPAQ9P0L0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 RPS4XP3-201ENST00000398541 413 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 RAP1BP1-201ENST00000412709 553 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 SAR1AP4-201ENST00000429225 591 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AL513043.1-201ENST00000439124 535 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 CDC27P1-201ENST00000445384 715 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 MRPL50P4-201ENST00000446432 475 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 NDUFA5P7-201ENST00000452914 242 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 SNORA76.2-201ENST00000517095 137 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 ZNF705CP-201ENST00000530515 889 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 DNAJC8P1-201ENST00000554535 372 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AL355836.1-201ENST00000555951 870 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 MIR3605-201ENST00000583214 100 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AC091057.2-201ENST00000602594 792 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AL020997.2-201ENST00000602607 184 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 GAS5-AS1-201ENST00000602767 694 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AC055876.5-201ENST00000605667 259 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 AP003122.6-201ENST00000623831 495 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 MIR3651-201ENST00000630427 90 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
VAPAQ9P0L0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms