Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 OR9M1P-201ENST00000459641 921 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC097493.1-201ENST00000463958 372 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC010460.1-201ENST00000507087 466 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 CBX3P3-201ENST00000508108 532 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC010625.1-201ENST00000511296 403 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC026412.2-201ENST00000512270 1075 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 OR8R1P-201ENST00000543943 764 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AL391156.1-201ENST00000554965 554 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC006960.3-201ENST00000561845 705 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 MIR4504-201ENST00000577413 92 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AL365503.1-201ENST00000605247 905 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 RNU6-88P-201ENST00000606801 100 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC010678.1-201ENST00000614118 713 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC009509.4-201ENST00000619202 509 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC099842.1-201ENST00000619919 596 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 MTCO1P23-201ENST00000415223 1526 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 CEP170P1-201ENST00000502249 4587 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AL079343.1-201ENST00000572358 1771 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AL021368.2-201ENST00000606125 5352 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 RNA5SP235-201ENST00000365411 114 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 RPL7P60-201ENST00000397636 735 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 DEFB108C-201ENST00000400154 252 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 Y_RNA.599-201ENST00000410489 109 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC105402.2-201ENST00000438503 358 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 MTCO3P2-201ENST00000457365 171 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AP000873.1-201ENST00000463987 400 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AP000893.1-201ENST00000474462 794 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC068305.1-201ENST00000497406 726 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC110768.1-201ENST00000509222 400 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC079140.3-201ENST00000511111 550 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 RN7SKP82-201ENST00000516786 223 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AP006245.1-201ENST00000522549 120 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC136618.2-201ENST00000575091 400 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 MIR548AB-201ENST00000584917 84 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC078795.2-201ENST00000602835 1252 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC067959.1-201ENST00000604334 379 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC012360.2-201ENST00000609349 391 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC025594.3-201ENST00000613068 790 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC068724.3-201ENST00000625906 87 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 DCAF13P1-201ENST00000495256 1330 ntBASIC3.84□□□□□ -1.79
SMARCAL1Q9NZC9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.84□□□□□ -1.8
SMARCAL1Q9NZC9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
SMARCAL1Q9NZC9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.84□□□□□ -1.8
SMARCAL1Q9NZC9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 MIR30E-201ENST00000362104 92 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 RNU6-501P-201ENST00000364072 100 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 RNY3P10-201ENST00000384764 102 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 RNU6-192P-201ENST00000391253 100 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 MTCYBP36-201ENST00000404146 440 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 PPIAP31-201ENST00000405422 495 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 RPL7P30-201ENST00000420888 709 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 AL365184.2-201ENST00000431139 435 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 MTND4P6-201ENST00000438297 472 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 RPS24P1-201ENST00000438550 371 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 ST13P20-201ENST00000447996 1065 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 snoU13.7-201ENST00000459220 104 ntBASIC3.83□□□□□ -1.8
SMARCAL1Q9NZC9 MEMO1P3-201ENST00000459811 302 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms