Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 Z92545.1-201ENST00000411782 234 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC092638.1-201ENST00000411966 1275 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC007899.1-201ENST00000412776 775 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 BOLA3P4-201ENST00000418151 400 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 MTCYBP32-201ENST00000427945 1084 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC012497.1-201ENST00000429392 575 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 UBE2V1P6-201ENST00000430840 422 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 MTCYBP15-201ENST00000433123 1127 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 SETP8-201ENST00000435341 628 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 RPL23AP22-201ENST00000437556 453 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 FTH1P1-201ENST00000437933 532 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 MTCO1P48-201ENST00000448024 1096 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 BTF3P5-201ENST00000457252 467 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 RPS17P11-201ENST00000474297 293 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 RPL30P14-201ENST00000482744 348 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AP003973.1-201ENST00000604639 691 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC010738.1-201ENST00000604970 987 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AP000238.1-201ENST00000608759 426 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AP005137.2-201ENST00000609238 400 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC106028.5-201ENST00000610332 395 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC006249.1-201ENST00000621223 471 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AL353748.2-201ENST00000622148 471 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC091903.1-201ENST00000624322 454 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC091925.2-201ENST00000625059 256 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 MFSD8-245ENST00000641743 948 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 MAPK10-322ENST00000641485 4530 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AC233263.6-201ENST00000631132 1963 ntBASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 RNU5B-1-201ENST00000363286 116 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 RNA5SP293-201ENST00000410527 113 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC092634.6-201ENST00000418558 192 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 RAC1P8-201ENST00000427086 527 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 Z93242.1-201ENST00000427102 353 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 MTND4LP10-201ENST00000435146 291 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AL645638.1-201ENST00000440519 361 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AL031183.1-201ENST00000457667 207 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 RPS27P29-201ENST00000463110 252 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 ST13P14-201ENST00000474095 734 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 OR10V3P-201ENST00000525712 725 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 MIR4276-201ENST00000584832 70 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AP001542.2-201ENST00000593141 364 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AF131215.7-201ENST00000602443 707 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC106900.2-201ENST00000604994 317 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AC090617.7-201ENST00000623952 126 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 AL356274.2-201ENST00000624379 3752 ntBASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KLHL28Q9NXS3 Z83843.1-201ENST00000604070 3685 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms