Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AL590233.1-201ENST00000430017 456 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC073063.1-201ENST00000434352 607 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC092573.2-201ENST00000434546 243 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC091862.1-201ENST00000438016 1100 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 RPS29P31-201ENST00000446147 164 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 MTCO3P11-201ENST00000455103 774 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 RPL31P60-201ENST00000478450 367 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC092902.1-201ENST00000486999 259 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 CAB39P1-201ENST00000502277 460 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 ARL4AP2-201ENST00000507378 601 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 HMGN1P15-201ENST00000513870 295 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 DEFB130C-202ENST00000530001 230 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC092451.2-201ENST00000538746 658 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 OR7K1P-201ENST00000546439 926 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 HSPE1P3-201ENST00000559254 309 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC037471.2-201ENST00000564941 598 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC126365.2-201ENST00000580630 379 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC105224.1-201ENST00000587055 421 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 DUXAP4-201ENST00000603046 613 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC007275.1-201ENST00000621243 671 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AC244100.1-202ENST00000621554 382 ntBASIC3.32□□□□□ -1.88
HPF1Q9NWY4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPF1Q9NWY4 AP003122.5-201ENST00000527668 3766 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 TPTE2P4-201ENST00000258589 1605 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 CEP170P1-201ENST00000502249 4587 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 FRG1BP-201ENST00000278882 761 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AL024507.1-201ENST00000412741 274 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 CCDC58P2-201ENST00000417131 366 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 RPL23AP58-201ENST00000440453 469 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 RPL21P23-201ENST00000446654 460 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC022483.1-201ENST00000514020 567 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 OR5B10P-201ENST00000532869 642 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC023161.2-201ENST00000551218 780 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 CCDC58P3-201ENST00000590792 430 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC024220.1-201ENST00000603675 484 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AL357559.1-201ENST00000622228 274 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AP003355.3-201ENST00000623465 114 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 AC090617.7-201ENST00000623952 126 ntBASIC3.31□□□□□ -1.88
HPF1Q9NWY4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HPF1Q9NWY4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 CDR1-202ENST00000625883 1485 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 RNU2-42P-201ENST00000410697 113 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC007742.1-201ENST00000425789 329 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC234781.2-201ENST00000426370 994 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 SAR1AP4-201ENST00000429225 591 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 ELOCP26-201ENST00000436067 329 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms