Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 OR52B1P-201ENST00000316506 909 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 RNU6-451P-201ENST00000362921 107 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 Y_RNA.157-201ENST00000363638 102 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 RNY4P16-201ENST00000364768 94 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 RNU6-146P-201ENST00000384602 108 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 MIR200C-201ENST00000384980 68 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AL606489.2-201ENST00000433886 234 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AL353597.2-202ENST00000434901 373 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AC004938.1-201ENST00000438468 308 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AC010486.1-201ENST00000511793 424 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 RNU6-835P-201ENST00000516974 104 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 RNU6-410P-201ENST00000517006 107 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AC090572.1-201ENST00000519251 160 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 OR4T1P-201ENST00000554933 911 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AL136363.1-201ENST00000605349 337 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 AC010338.1-201ENST00000621823 717 ntBASIC5.35□□□□□ -1.55
LTBP3Q9NS15 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LTBP3Q9NS15 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 RNU1-14P-201ENST00000362759 152 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 Y_RNA.86-201ENST00000363020 111 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 RNU6-525P-201ENST00000363685 104 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 SNORA69-201ENST00000383895 132 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 RNU2-15P-201ENST00000410692 191 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 RNU2-62P-201ENST00000410868 191 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 OR9R1P-201ENST00000412200 877 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AL157831.1-201ENST00000426134 473 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 COX6B1P7-201ENST00000430845 235 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AL445584.1-201ENST00000431451 330 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 BNIP3P2-201ENST00000441221 577 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 MTND1P9-201ENST00000453775 944 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC245028.2-201ENST00000458673 253 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 RPS27AP17-201ENST00000463344 455 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 RN7SL812P-201ENST00000493791 279 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC139783.2-201ENST00000504847 1145 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC006499.6-201ENST00000511169 607 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 SNORA40.12-201ENST00000516329 111 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 RNA5SP337-201ENST00000517007 109 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 IGLVIV-53-201ENST00000520107 367 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 Z84480.1-201ENST00000605131 311 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AL121655.1-201ENST00000605811 308 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AL391813.2-201ENST00000609113 322 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC069200.1-201ENST00000609511 323 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC022106.2-201ENST00000620114 757 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AC244100.1-202ENST00000621554 382 ntBASIC5.34□□□□□ -1.55
LTBP3Q9NS15 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBP3Q9NS15 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LTBP3Q9NS15 RNVU1-3-201ENST00000364313 161 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms