Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCNB1IP1Q9NPC3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.87□□□□□ -1.95
CCNB1IP1Q9NPC3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCNB1IP1Q9NPC3 AL513185.3-201ENST00000433335 1300 ntBASIC2.87□□□□□ -1.95
CCNB1IP1Q9NPC3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCNB1IP1Q9NPC3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCNB1IP1Q9NPC3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AL031121.1-201ENST00000406553 254 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 HMGN1P24-201ENST00000412282 298 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 DEFB130D-201ENST00000426866 237 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AL159987.2-201ENST00000432754 307 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AL590762.3-201ENST00000436372 640 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AL592437.1-201ENST00000443781 492 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 OR6K5P-201ENST00000447050 945 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AL590664.1-201ENST00000448065 339 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC021678.1-201ENST00000505195 936 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 CBX3P3-201ENST00000508108 532 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC107871.2-201ENST00000612894 502 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC006249.1-201ENST00000621223 471 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 AC026634.1-201ENST00000634369 198 ntBASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
CCNB1IP1Q9NPC3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 RNU5D-1-201ENST00000363299 116 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 RNA5SP72-201ENST00000364442 117 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 RPS4XP3-201ENST00000398541 413 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AL136133.1-201ENST00000413694 376 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 RPL7P30-201ENST00000420888 709 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 YME1L1P1-201ENST00000429435 297 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC097713.2-201ENST00000430199 356 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 COX6CP2-201ENST00000444980 225 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 ELOCP23-201ENST00000452014 332 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 GSTA11P-201ENST00000452866 669 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AL359385.1-201ENST00000456509 365 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 WBP1LP4-201ENST00000505043 344 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC027338.1-201ENST00000514840 825 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 OR8K2P-201ENST00000524645 927 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AP001317.1-201ENST00000531194 960 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 SNRPGP1-201ENST00000553864 222 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AL031985.2-201ENST00000600955 480 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC096947.1-201ENST00000603233 470 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC026741.1-201ENST00000605892 482 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 uc_338.25-201ENST00000613756 156 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AL118556.2-201ENST00000614375 824 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AL138880.2-201ENST00000616214 239 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC231759.1-201ENST00000616455 597 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 MIR6075-201ENST00000620782 95 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 U6.105-201ENST00000637379 88 ntBASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCNB1IP1Q9NPC3 MTCO1P23-201ENST00000415223 1526 ntBASIC2.84□□□□□ -1.95
CCNB1IP1Q9NPC3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCNB1IP1Q9NPC3 RNU6-1155P-201ENST00000363554 107 ntBASIC2.84□□□□□ -1.95
CCNB1IP1Q9NPC3 RNU6-799P-201ENST00000363567 107 ntBASIC2.84□□□□□ -1.95
CCNB1IP1Q9NPC3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCNB1IP1Q9NPC3 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.84□□□□□ -1.95
CCNB1IP1Q9NPC3 SNORA1.3-201ENST00000384676 136 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms