Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC096772.1-201ENST00000609146 564 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 MIR221-201ENST00000385135 110 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AC023128.2-201ENST00000420880 1223 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 CACYBPP1-201ENST00000438592 684 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AC108078.1-201ENST00000508073 725 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AC021146.1-201ENST00000511202 716 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 SNORA9.3-201ENST00000516383 129 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.03□□□□□ -2.08
CHD8Q9HCK8 RNA5SP210-201ENST00000391034 120 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 MIR548J-201ENST00000408833 112 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.03□□□□□ -2.08
CHD8Q9HCK8 AL445646.1-201ENST00000431784 216 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 COX6CP2-201ENST00000444980 225 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 AL590399.6-201ENST00000446396 307 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 SNORD13-201ENST00000459299 104 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 RNA5SP182-201ENST00000516064 82 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 MTCYBP20-201ENST00000524239 1129 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 AC022882.1-201ENST00000532142 501 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 MIR4255-201ENST00000579351 72 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.03□□□□□ -2.08
CHD8Q9HCK8 AC091834.1-201ENST00000614543 472 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 MIR6766-201ENST00000622641 72 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.03□□□□□ -2.08
CHD8Q9HCK8 FRG1DP-201ENST00000635586 771 ntBASIC2.03□□□□□ -2.08
CHD8Q9HCK8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHD8Q9HCK8 AC006378.2-201ENST00000623178 2476 ntBASIC2.03□□□□□ -2.09
CHD8Q9HCK8 RNA5SP62-201ENST00000363457 110 ntBASIC2.03□□□□□ -2.09
CHD8Q9HCK8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.09
CHD8Q9HCK8 RNU6-1105P-201ENST00000384774 107 ntBASIC2.03□□□□□ -2.09
CHD8Q9HCK8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.03□□□□□ -2.09
CHD8Q9HCK8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
CHD8Q9HCK8 RPL23AP63-201ENST00000498752 471 ntBASIC2.03□□□□□ -2.09
CHD8Q9HCK8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
CHD8Q9HCK8 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.03□□□□□ -2.09
CHD8Q9HCK8 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.03□□□□□ -2.09
CHD8Q9HCK8 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.03□□□□□ -2.09
CHD8Q9HCK8 AC103810.8-201ENST00000607347 118 ntBASIC2.03□□□□□ -2.09
CHD8Q9HCK8 AL359198.2-201ENST00000611836 194 ntBASIC2.03□□□□□ -2.09
CHD8Q9HCK8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AC020633.1-201ENST00000468439 2247 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 RNA5SP456-201ENST00000364002 114 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AC240504.1-201ENST00000395709 845 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 RPL31P1-201ENST00000398116 372 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AC007560.1-201ENST00000426912 237 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 VN1R108P-201ENST00000431580 830 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AP000936.3-201ENST00000438127 255 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AL645939.1-201ENST00000453429 797 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 XKRY-201ENST00000510392 1100 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AC087854.1-201ENST00000519706 414 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AC002487.1-201ENST00000604565 994 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 OR11H5P-202ENST00000641612 1325 ntBASIC2.02□□□□□ -2.09
CHD8Q9HCK8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.02□□□□□ -2.09
CHD8Q9HCK8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 Y_RNA.274-201ENST00000364714 101 ntBASIC2.01□□□□□ -2.09
CHD8Q9HCK8 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 AC017099.1-201ENST00000448261 1028 ntBASIC2.01□□□□□ -2.09
CHD8Q9HCK8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 OR4R2P-201ENST00000530815 597 ntBASIC2.01□□□□□ -2.09
CHD8Q9HCK8 AL121821.2-201ENST00000556081 394 ntBASIC2.01□□□□□ -2.09
CHD8Q9HCK8 AMZ2P1-203ENST00000565833 850 ntBASIC2.01□□□□□ -2.09
CHD8Q9HCK8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 GCNT6-201ENST00000379591 934 ntBASIC2.01□□□□□ -2.09
CHD8Q9HCK8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 RPL30P3-201ENST00000424262 333 ntBASIC2.01□□□□□ -2.09
CHD8Q9HCK8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.01□□□□□ -2.09
CHD8Q9HCK8 AC022634.1-201ENST00000520765 532 ntBASIC2.01□□□□□ -2.09
CHD8Q9HCK8 AC136443.5-201ENST00000603741 370 ntBASIC2.01□□□□□ -2.09
CHD8Q9HCK8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
CHD8Q9HCK8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
CHD8Q9HCK8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CHD8Q9HCK8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2□□□□□ -2.09
CHD8Q9HCK8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CHD8Q9HCK8 AC016717.2-201ENST00000609089 5141 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 RNU4-41P-201ENST00000364426 143 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2□□□□□ -2.09
CHD8Q9HCK8 AL138785.1-201ENST00000425821 331 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 DUXAP8-207ENST00000456786 622 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 RPL23AP55-201ENST00000498163 452 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms