Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC105313.1-201ENST00000509121 353 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AC026801.2-201ENST00000515352 425 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 MTND4LP18-201ENST00000526864 291 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 ACTR3BP3-201ENST00000565577 979 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 ZNF192P1-203ENST00000565888 810 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 FAM60BP-201ENST00000578364 658 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 U73023.1-201ENST00000603134 700 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AL031775.1-201ENST00000607014 887 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AL391497.1-201ENST00000608671 547 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
BRF2Q9HAW0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 AC093591.3-201ENST00000634516 308 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 OR5BE1P-202ENST00000641168 1176 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 OR52H1-202ENST00000641796 1061 ntBASIC3.84□□□□□ -1.79
BRF2Q9HAW0 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.84□□□□□ -1.8
BRF2Q9HAW0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.84□□□□□ -1.8
BRF2Q9HAW0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
BRF2Q9HAW0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.84□□□□□ -1.8
BRF2Q9HAW0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.84□□□□□ -1.8
BRF2Q9HAW0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
BRF2Q9HAW0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.84□□□□□ -1.8
BRF2Q9HAW0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AL672296.1-201ENST00000427780 2158 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC006378.2-201ENST00000623178 2476 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 RNU6-769P-201ENST00000384407 104 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 RPL7AP73-201ENST00000413490 353 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 NPM1P11-201ENST00000417106 855 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 BX119904.4-201ENST00000424402 301 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AL356535.1-201ENST00000440335 398 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC118469.1-201ENST00000442943 488 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 RPL7P36-201ENST00000444633 681 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AP1S2P1-201ENST00000457344 379 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 RN7SL860P-201ENST00000473738 223 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC116337.2-201ENST00000477662 156 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC117522.2-201ENST00000510049 657 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 NDUFA5P2-201ENST00000519723 344 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 SNRPGP16-201ENST00000533275 226 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC034268.2-201ENST00000571784 482 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 OR4K8P-201ENST00000578842 1048 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 RN7SL600P-201ENST00000581811 299 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 PIGPP4-201ENST00000584447 307 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 TPMTP1-201ENST00000592307 737 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC110760.3-201ENST00000598794 467 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC012443.1-201ENST00000605605 231 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC091965.4-201ENST00000607691 587 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC012531.5-201ENST00000611375 151 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AL355810.1-201ENST00000614629 552 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AL591424.2-201ENST00000617023 128 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AL139089.1-201ENST00000620372 975 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC009268.2-201ENST00000621925 457 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 AC024560.2-201ENST00000507981 1497 ntBASIC3.83□□□□□ -1.8
BRF2Q9HAW0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRF2Q9HAW0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 RNU5F-6P-201ENST00000362979 116 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms