Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 HMGN2P8-201ENST00000391458 268 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 RPL23AP48-201ENST00000406913 488 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 ELOCP17-201ENST00000414751 326 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC073136.2-201ENST00000417282 849 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AL953862.1-201ENST00000423016 168 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 CYCSP4-201ENST00000429682 331 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC010881.1-201ENST00000433830 235 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC127537.2-201ENST00000439258 465 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AL831737.1-201ENST00000441288 271 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 FGF7P3-201ENST00000454645 303 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC116337.2-201ENST00000477662 156 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC090071.1-201ENST00000507713 644 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 SLC25A15P5-201ENST00000508033 253 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 RNU6-347P-201ENST00000516658 105 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 DUXAP2-201ENST00000519198 589 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 SERPINE4P-201ENST00000554978 281 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AL121576.1-201ENST00000556055 276 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC245505.1-201ENST00000556398 224 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC012065.4-201ENST00000602445 679 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AC027807.2-201ENST00000616099 408 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 U6.101-201ENST00000637707 76 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 AL079343.1-201ENST00000572358 1771 ntBASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCNX3Q9H6A9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 HSPA8P1-201ENST00000425843 1833 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC012020.1-201ENST00000624541 1728 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 Y_RNA.41-201ENST00000362646 102 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 RNY3P10-201ENST00000384764 102 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 RPL23AP29-201ENST00000397284 453 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AL139098.1-201ENST00000407291 389 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AL603766.1-201ENST00000407763 664 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC007899.1-201ENST00000412776 775 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC092641.1-201ENST00000440229 772 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 RPL39P6-201ENST00000448289 150 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 MTCYBP17-201ENST00000503579 789 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 POU5F1P7-201ENST00000508759 541 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 CDC42P4-201ENST00000510507 563 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC010342.1-201ENST00000514047 877 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 MTND5P4-201ENST00000514978 288 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 RNU6-720P-201ENST00000516363 108 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC008687.2-201ENST00000597865 520 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC008739.3-201ENST00000603262 127 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC019176.2-201ENST00000611579 315 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 MIR8058-201ENST00000615737 89 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC079228.1-201ENST00000624774 1049 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 RNU6-517P-201ENST00000384362 110 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AC073264.1-201ENST00000411508 416 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AL035423.1-201ENST00000420331 213 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 AL031736.2-201ENST00000426573 787 ntBASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.19□□□□□ -1.9
PCNX3Q9H6A9 RPS25P9-201ENST00000435591 252 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms