Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC107982.1-201ENST00000507171 1300 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 CR383658.2-201ENST00000547576 1525 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AL354685.2-201ENST00000448218 1447 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 CDR1-202ENST00000625883 1485 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RNU6-492P-201ENST00000363035 104 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RNU4-12P-201ENST00000365233 139 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RNU6-297P-201ENST00000384636 107 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 MIR23A-201ENST00000385245 73 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 Y_RNA.582-201ENST00000391023 95 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC138393.2-201ENST00000414742 246 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 OR51A5P-201ENST00000415429 942 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 BOLA3P4-201ENST00000418151 400 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RPL37P1-201ENST00000432310 284 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 MTND3P21-201ENST00000433774 331 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AL022238.1-201ENST00000442557 355 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 Z99127.3-201ENST00000448158 395 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC098824.1-201ENST00000453565 980 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RPL37P3-201ENST00000456825 293 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 snoU13.22-201ENST00000459428 104 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 ACTR3P3-201ENST00000480448 893 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RN7SL323P-201ENST00000494712 295 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 SETP14-201ENST00000497538 873 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC011352.3-201ENST00000505162 593 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RN7SKP298-201ENST00000515950 94 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RNU7-143P-201ENST00000516781 65 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RNU6-1261P-201ENST00000517194 104 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RAB11AP2-201ENST00000545905 639 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 GLYCAM1-201ENST00000546596 285 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC141257.3-201ENST00000572906 215 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC078899.5-201ENST00000612475 178 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC116447.1-201ENST00000613153 453 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 Y_RNA.804-201ENST00000615262 101 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 CR381653.2-201ENST00000624041 768 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 MIR3688-2-201ENST00000636963 87 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC009229.4-201ENST00000623854 1947 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 RPS4XP5-202ENST00000449995 1334 ntBASIC4.14□□□□□ -1.75
EBF3Q9H4W6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
EBF3Q9H4W6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC011155.1-201ENST00000316512 456 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 MIR181A1-201ENST00000385026 110 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 FGF7P8-201ENST00000402994 292 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 RN7SKP156-201ENST00000410308 342 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 RAB9AP3-201ENST00000412737 573 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC069157.1-201ENST00000421749 137 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 RPS20P1-201ENST00000434853 354 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 RPL7P28-201ENST00000437739 740 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 MTND4LP16-201ENST00000440828 295 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 NOTCH2P1-201ENST00000443481 624 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC112653.1-201ENST00000443851 386 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 RAB9AP1-201ENST00000449393 573 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 KLF3P2-201ENST00000465138 268 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC006517.1-201ENST00000480485 328 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 MTCO1P30-201ENST00000515244 580 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 RNU6-347P-201ENST00000516658 105 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 RNA5SP179-201ENST00000517284 121 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms