Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC006390.1-201ENST00000508068 283 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 MTND5P4-201ENST00000514978 288 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC022690.1-201ENST00000526681 550 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC122134.1-202ENST00000569111 1201 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 RPL23AP92-201ENST00000603609 255 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AL160237.3-201ENST00000604114 1013 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AL158211.2-201ENST00000607282 395 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC231759.1-201ENST00000616455 597 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC091953.5-201ENST00000622919 233 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AL157770.1-201ENST00000623049 439 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 CR381653.2-201ENST00000624041 768 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 Z83843.1-201ENST00000604070 3685 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.56□□□□□ -2
SLIRPQ9GZT3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC090740.1-201ENST00000623193 2262 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLIRPQ9GZT3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLIRPQ9GZT3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 SNORD15B-201ENST00000384714 146 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 MIR512-1-201ENST00000384913 84 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 RNU6-1300P-201ENST00000391046 108 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AL035405.1-201ENST00000400795 710 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AL136372.1-201ENST00000403060 228 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 MRPL50P2-201ENST00000416821 482 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AL513175.2-201ENST00000422071 443 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 ARF4P4-201ENST00000439608 520 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC016696.1-201ENST00000446949 318 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 RPL21P8-201ENST00000465083 535 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 MTCO1P35-201ENST00000515270 228 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 SETP2-201ENST00000553886 926 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 LARP7P2-201ENST00000575306 125 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC053481.3-201ENST00000577881 843 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC008962.1-201ENST00000605729 304 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC005046.1-201ENST00000608515 625 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AL592148.2-201ENST00000612210 372 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AL162274.2-201ENST00000614406 332 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 AP000943.4-201ENST00000622912 357 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AC087821.2-201ENST00000637086 450 ntBASIC2.56□□□□□ -2
SLIRPQ9GZT3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.56□□□□□ -2
SLIRPQ9GZT3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.56□□□□□ -2
SLIRPQ9GZT3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLIRPQ9GZT3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
SLIRPQ9GZT3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLIRPQ9GZT3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 SAR1AP2-201ENST00000392696 594 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 RPL21P17-201ENST00000397467 475 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 RPS3AP26-201ENST00000398259 784 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AL049693.1-201ENST00000402760 611 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 PPIAP31-201ENST00000405422 495 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 RNU2-15P-201ENST00000410692 191 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 BX323014.1-201ENST00000412876 237 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 EZH2P1-201ENST00000431167 291 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 TRIM60P18-201ENST00000441518 828 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 AL162389.1-201ENST00000449233 177 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 RPL26P28-201ENST00000451325 435 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 KC877373.1-201ENST00000479066 408 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.55□□□□□ -2
SLIRPQ9GZT3 SNORD59.2-201ENST00000516873 68 ntBASIC2.55□□□□□ -2
SLIRPQ9GZT3 RNU6-467P-201ENST00000517027 110 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms