Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.16□□□□□ -1.9
UPF3BQ9BZI7 AC096947.1-201ENST00000603233 470 ntBASIC3.16□□□□□ -1.9
UPF3BQ9BZI7 AC007619.2-201ENST00000605743 379 ntBASIC3.16□□□□□ -1.9
UPF3BQ9BZI7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.16□□□□□ -1.9
UPF3BQ9BZI7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
UPF3BQ9BZI7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 RPS3AP26-201ENST00000398259 784 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AL121972.1-201ENST00000402023 252 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 RNA5SP21-201ENST00000410917 96 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 HSPE1P1-201ENST00000421494 318 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AC003685.2-201ENST00000422795 395 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 HMGB1P18-201ENST00000438801 619 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 MTCYBP37-201ENST00000510642 1133 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AP004371.1-201ENST00000525240 214 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AC006963.1-201ENST00000624003 1052 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AC119674.1-220ENST00000641502 1048 ntBASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UPF3BQ9BZI7 MAPK10-322ENST00000641485 4530 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 AL512646.1-201ENST00000269395 1077 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 MIR7-1-201ENST00000384871 110 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 PRRC2CP1-201ENST00000404428 159 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 TOMM22P1-201ENST00000418578 312 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 SAR1AP4-201ENST00000429225 591 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 RPL36AP6-201ENST00000435770 321 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 AL513328.1-201ENST00000446460 224 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 ST13P20-201ENST00000447996 1065 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 snoU13.3-201ENST00000459441 104 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 AC093663.2-201ENST00000484625 313 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 AC008413.1-201ENST00000511864 177 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 RN7SKP283-201ENST00000517197 270 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 AC123904.3-201ENST00000547218 814 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 AC107905.1-201ENST00000616204 426 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 TAB3P1-202ENST00000452645 1634 ntBASIC3.14□□□□□ -1.91
UPF3BQ9BZI7 RNU4-23P-201ENST00000362839 140 ntBASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 MTND4P13-201ENST00000402078 1023 ntBASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 SRIP2-201ENST00000428470 166 ntBASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 AC109583.1-201ENST00000432156 268 ntBASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 OR6K1P-201ENST00000456766 971 ntBASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 AC008837.1-201ENST00000511513 412 ntBASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 AP003102.1-201ENST00000525638 661 ntBASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 AC106734.1-201ENST00000568646 663 ntBASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.13□□□□□ -1.91
UPF3BQ9BZI7 AC009501.3-201ENST00000605001 1352 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 FAM133CP-201ENST00000332869 704 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 DEFB109C-201ENST00000382575 264 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 DEFB109B-201ENST00000382656 264 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 RPL21P75-201ENST00000396599 483 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 RPL21P28-201ENST00000401418 483 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AL592114.1-201ENST00000403842 483 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 XKRYP6-201ENST00000440468 1116 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 XKRYP3-201ENST00000442113 1116 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 RPL23AP20-201ENST00000447965 421 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AL035407.2-201ENST00000454090 378 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 RPL21P39-201ENST00000463605 483 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AC133134.1-201ENST00000466800 359 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AC011979.1-201ENST00000472300 483 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 RPL21P93-201ENST00000480465 489 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AC233702.1-201ENST00000482905 502 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AC087190.1-201ENST00000484462 480 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms