Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC112220.3-201ENST00000605502 502 ntBASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 HSPE1P14-201ENST00000605812 302 ntBASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 AC018638.7-201ENST00000605836 1114 ntBASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 AP001521.1-201ENST00000609150 300 ntBASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 AC119674.1-207ENST00000641355 633 ntBASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 SGO1P2-201ENST00000429458 1589 ntBASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC28BQ9BUN5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 RNU6-1122P-201ENST00000384449 107 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 SSXP10-201ENST00000402595 565 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 BTBD10P2-201ENST00000404779 676 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AL023807.1-201ENST00000407932 359 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC073264.1-201ENST00000411508 416 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC012065.2-201ENST00000421295 375 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 OR4C10P-201ENST00000434991 931 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 HMGB1P12-201ENST00000438594 598 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AL354941.1-201ENST00000438600 464 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 MTCO3P11-201ENST00000455103 774 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 RPL18AP17-201ENST00000455326 198 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 RPS4XP13-201ENST00000483219 789 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 VN1R105P-201ENST00000486595 910 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC112198.1-201ENST00000505369 1220 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC021146.8-201ENST00000507455 733 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 MRPS33P3-201ENST00000513456 322 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 RN7SKP122-201ENST00000515923 296 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 RAB9BP1-201ENST00000519581 626 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 OR5AK1P-201ENST00000524837 922 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC034268.2-201ENST00000571784 482 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 MIR4999-201ENST00000585029 91 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC006116.10-201ENST00000591836 581 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC006557.5-201ENST00000603126 811 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AL353778.1-201ENST00000603149 408 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC004987.4-201ENST00000603383 338 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC103881.1-201ENST00000603476 538 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC245297.2-201ENST00000610119 565 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC069234.5-201ENST00000611056 416 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 MIR6875-201ENST00000617506 72 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 AC092650.2-201ENST00000619984 902 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 SNORD39.4-201ENST00000620099 78 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 MIR6830-201ENST00000636015 70 ntBASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
CCDC28BQ9BUN5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 RNA5SP51-201ENST00000364750 119 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC007066.1-201ENST00000392902 381 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AL450338.1-201ENST00000407987 512 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 RN7SKP111-201ENST00000410349 271 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 RPL32P35-201ENST00000415214 394 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC098592.1-201ENST00000419352 333 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 RPS15AP40-201ENST00000419621 391 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AL590103.1-201ENST00000434488 307 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 SETP8-201ENST00000435341 628 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 MTCYBP3-201ENST00000445588 1137 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AL606662.1-201ENST00000445763 553 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 Z99127.3-201ENST00000448158 395 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 ART2BP-201ENST00000453501 499 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 RPS27AP1-201ENST00000475545 471 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC012181.1-201ENST00000479895 423 ntBASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC28BQ9BUN5 AC010486.2-201ENST00000505572 483 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms