Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AL356489.2-201ENST00000566968 3528 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.81□□□□□ -2.12
COL12A1Q99715 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
COL12A1Q99715 MIR21-201ENST00000362134 72 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 MIR1183-201ENST00000408856 89 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.81□□□□□ -2.12
COL12A1Q99715 HMGN2P28-201ENST00000606102 262 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 AL008729.2-201ENST00000606393 473 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
COL12A1Q99715 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.81□□□□□ -2.12
COL12A1Q99715 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL12A1Q99715 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
COL12A1Q99715 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL12A1Q99715 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.81□□□□□ -2.12
COL12A1Q99715 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.81□□□□□ -2.12
COL12A1Q99715 RNA5SP129-201ENST00000410276 118 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.81□□□□□ -2.12
COL12A1Q99715 AC234782.4-201ENST00000417646 1048 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 ATG3P1-201ENST00000419507 911 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.81□□□□□ -2.12
COL12A1Q99715 GAPDHP27-201ENST00000447427 1020 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 SNRPFP4-201ENST00000456366 242 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 AC068305.1-201ENST00000497406 726 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.81□□□□□ -2.12
COL12A1Q99715 AC068339.2-201ENST00000534395 618 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 AC073869.7-201ENST00000640874 297 ntBASIC1.81□□□□□ -2.12
COL12A1Q99715 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.81□□□□□ -2.12
COL12A1Q99715 AC107021.2-201ENST00000567714 2095 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 UBE2V1P5-201ENST00000440070 405 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.8□□□□□ -2.12
COL12A1Q99715 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.8□□□□□ -2.12
COL12A1Q99715 RN7SKP40-201ENST00000517211 242 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.8□□□□□ -2.12
COL12A1Q99715 AC011604.1-201ENST00000545978 196 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.8□□□□□ -2.12
COL12A1Q99715 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.8□□□□□ -2.12
COL12A1Q99715 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL12A1Q99715 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL12A1Q99715 PROS2P-201ENST00000474651 1951 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.8□□□□□ -2.12
COL12A1Q99715 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.8□□□□□ -2.12
COL12A1Q99715 XKRY-201ENST00000510392 1100 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AL356280.1-201ENST00000603614 379 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AL355578.1-201ENST00000607405 1328 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL12A1Q99715 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.8□□□□□ -2.12
COL12A1Q99715 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
COL12A1Q99715 AL021407.1-201ENST00000404531 386 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AL358075.3-201ENST00000426289 226 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 RPS24P8-201ENST00000431490 402 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.8□□□□□ -2.12
COL12A1Q99715 AC092473.1-201ENST00000441098 221 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.8□□□□□ -2.12
COL12A1Q99715 RPS29P12-201ENST00000460178 152 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AC021146.8-201ENST00000507455 733 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AC008526.1-201ENST00000509149 338 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.8□□□□□ -2.12
COL12A1Q99715 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.8□□□□□ -2.12
COL12A1Q99715 AL512598.1-201ENST00000610158 273 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 CU459211.1-201ENST00000635667 749 ntBASIC1.8□□□□□ -2.12
COL12A1Q99715 AC233981.2-201ENST00000611524 1614 ntBASIC1.79□□□□□ -2.12
COL12A1Q99715 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
COL12A1Q99715 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.79□□□□□ -2.12
COL12A1Q99715 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.79□□□□□ -2.12
COL12A1Q99715 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL12A1Q99715 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL12A1Q99715 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL12A1Q99715 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL12A1Q99715 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.79□□□□□ -2.12
COL12A1Q99715 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
COL12A1Q99715 EI24P1-201ENST00000416584 867 ntBASIC1.79□□□□□ -2.12
COL12A1Q99715 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.79□□□□□ -2.12
COL12A1Q99715 AC009237.8-201ENST00000445492 379 ntBASIC1.79□□□□□ -2.12
COL12A1Q99715 RPS4XP11-201ENST00000446897 772 ntBASIC1.79□□□□□ -2.12
COL12A1Q99715 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.79□□□□□ -2.12
COL12A1Q99715 AC025260.1-201ENST00000548858 430 ntBASIC1.79□□□□□ -2.12
COL12A1Q99715 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.79□□□□□ -2.12
COL12A1Q99715 HMGB1P31-201ENST00000437242 427 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.78□□□□□ -2.12
COL12A1Q99715 AC055876.1-202ENST00000567053 138 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.78□□□□□ -2.12
COL12A1Q99715 AC092650.2-201ENST00000619984 902 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.78□□□□□ -2.12
COL12A1Q99715 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
COL12A1Q99715 MIR96-201ENST00000362288 78 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
COL12A1Q99715 AL159169.1-201ENST00000421119 127 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
COL12A1Q99715 RPS27P29-201ENST00000463110 252 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 RN7SL297P-201ENST00000483161 293 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 HMGN1P7-201ENST00000491722 313 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 IGKV2D-36-201ENST00000518643 226 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 MIR4644-201ENST00000579929 84 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL12A1Q99715 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.78□□□□□ -2.12
COL12A1Q99715 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL12A1Q99715 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms