Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC00622-201ENST00000562811 1570 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 CPHL1P-201ENST00000461341 3407 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-216P-201ENST00000363282 104 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 SNORA33.2-201ENST00000365413 134 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 SNORA69-201ENST00000383895 132 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-657P-201ENST00000383904 107 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-43P-201ENST00000384302 107 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 TXNP7-201ENST00000406296 293 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AL034374.1-201ENST00000406329 351 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 RNA5SP118-201ENST00000410385 109 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 RN7SKP58-201ENST00000411010 305 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 NDUFB4P5-201ENST00000415445 361 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AL356387.2-201ENST00000422272 243 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 NUP35P1-201ENST00000422734 947 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 RPEP3-201ENST00000425462 676 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 NIPA2P1-201ENST00000426223 976 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL36AP53-201ENST00000432891 316 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 SEPT14P3-201ENST00000439401 183 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AL732372.2-207ENST00000445840 183 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC073587.1-201ENST00000447093 876 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 MTCO1P27-201ENST00000448269 226 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 SEPT14P2-201ENST00000453405 183 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 PPIAP21-201ENST00000464473 501 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 POU5F1P7-201ENST00000508759 541 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 SEPT14P4-201ENST00000513445 186 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 FO082796.1-201ENST00000523795 183 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC015912.2-201ENST00000571053 181 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 MIR3682-201ENST00000581338 84 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC100830.2-201ENST00000581636 240 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC091178.1-203ENST00000584586 279 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 BPIFA4P-203ENST00000603168 689 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC113139.1-201ENST00000605049 239 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC010680.4-201ENST00000605334 543 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC008966.2-201ENST00000606157 453 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 7SK.10-201ENST00000621414 298 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AP006248.2-201ENST00000623309 592 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 AC119674.1-212ENST00000641155 993 ntBASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP1Q96SZ6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AL118496.1-201ENST00000440201 1812 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 CKAP2P1-201ENST00000555477 2049 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 SNRPEP3-201ENST00000338402 276 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.133-201ENST00000363428 110 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.145-201ENST00000363527 102 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.157-201ENST00000363638 102 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RNA5SP447-201ENST00000363749 119 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.259-201ENST00000364619 101 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 SNORD42.2-201ENST00000365570 69 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU1-39P-201ENST00000383897 165 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-74P-201ENST00000384235 107 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-769P-201ENST00000384407 104 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-505P-201ENST00000384427 107 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-146P-201ENST00000384602 108 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 MIR141-201ENST00000384975 95 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RPS20P2-201ENST00000402520 389 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RN7SKP32-201ENST00000410167 303 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 MTCYBP8-201ENST00000422855 651 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms