Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 SNORA26.8-201ENST00000391306 124 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 MIR298-201ENST00000401212 88 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 MIR1302-8-201ENST00000408342 128 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 SNRPFP1-201ENST00000414761 252 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 SSXP9-201ENST00000417503 292 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 RPL31P12-201ENST00000422587 358 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC079780.1-201ENST00000428259 207 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 OR4K11P-201ENST00000431829 904 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC098826.1-201ENST00000433943 471 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 SETP8-201ENST00000435341 628 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC129850.1-201ENST00000436203 508 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC004866.2-201ENST00000438285 481 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 RPL22P17-201ENST00000438729 315 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 RAC1P7-201ENST00000445367 377 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC093534.1-201ENST00000504977 132 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 VN1R104P-201ENST00000505115 1009 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC022483.1-201ENST00000514020 567 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AP001922.4-201ENST00000526967 290 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AP000676.2-201ENST00000529711 301 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 PCNPP1-201ENST00000552501 511 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AL845331.3-202ENST00000562856 261 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 UBE2FP2-201ENST00000566646 462 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC022968.1-201ENST00000567372 442 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC091042.1-201ENST00000579213 173 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 OR7E18P-201ENST00000592589 702 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AP001429.1-201ENST00000602568 530 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AL451086.1-201ENST00000605596 223 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 BRDTP1-201ENST00000605735 677 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 OR2AS2P-201ENST00000606902 342 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AL353748.2-201ENST00000622148 471 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC018445.2-201ENST00000622987 260 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 MIR7153-201ENST00000637758 57 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 CCT4P2-201ENST00000233836 1548 ntBASIC3.8□□□□□ -1.8
NR1H4Q96RI1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H4Q96RI1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AL513185.3-201ENST00000433335 1300 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 RNU6-809P-201ENST00000384461 107 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 SKINT1L-201ENST00000401057 817 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 MTCYBP36-201ENST00000404146 440 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 RNU2-37P-201ENST00000410695 177 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 MTND1P21-201ENST00000412991 285 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 NPM1P11-201ENST00000417106 855 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AL359073.1-201ENST00000448036 403 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 NANOGP10-201ENST00000453325 895 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 RPL23AP81-201ENST00000455252 467 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 MTCO1P42-201ENST00000457379 726 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AP000797.1-201ENST00000478870 387 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC110792.1-201ENST00000491826 472 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AF131216.2-201ENST00000512316 564 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 MTCO2P32-201ENST00000514865 403 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC093331.1-201ENST00000521474 169 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 ACTR3BP3-201ENST00000565577 979 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 MIR3690-201ENST00000580266 75 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 MIR4436B2-201ENST00000581415 91 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 MIR4436B1-201ENST00000583272 91 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AL031985.2-201ENST00000600955 480 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC010620.1-201ENST00000601088 1102 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 U73023.1-201ENST00000603134 700 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AP001330.4-201ENST00000604350 154 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC073114.1-201ENST00000612027 490 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms