Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 NCSTNP1-201ENST00000406229 144 ntBASIC1.85□□□□□ -2.11
SPG11Q96JI7 RNU2-32P-201ENST00000411193 191 ntBASIC1.85□□□□□ -2.11
SPG11Q96JI7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.85□□□□□ -2.11
SPG11Q96JI7 RPL23AP74-201ENST00000437246 471 ntBASIC1.85□□□□□ -2.11
SPG11Q96JI7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SPG11Q96JI7 AL118520.1-201ENST00000450770 291 ntBASIC1.85□□□□□ -2.11
SPG11Q96JI7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.85□□□□□ -2.11
SPG11Q96JI7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.85□□□□□ -2.11
SPG11Q96JI7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.85□□□□□ -2.11
SPG11Q96JI7 AL451074.6-201ENST00000608512 729 ntBASIC1.85□□□□□ -2.11
SPG11Q96JI7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SPG11Q96JI7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
SPG11Q96JI7 U8.10-201ENST00000384260 133 ntBASIC1.84□□□□□ -2.11
SPG11Q96JI7 HSPE1P28-201ENST00000443139 211 ntBASIC1.84□□□□□ -2.11
SPG11Q96JI7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.84□□□□□ -2.11
SPG11Q96JI7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SPG11Q96JI7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SPG11Q96JI7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.12
SPG11Q96JI7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SPG11Q96JI7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.84□□□□□ -2.12
SPG11Q96JI7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SPG11Q96JI7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
SPG11Q96JI7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 MIR625-201ENST00000385047 85 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 MTND2P29-201ENST00000438595 412 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC090543.1-201ENST00000492168 485 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC122134.1-201ENST00000565664 1104 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 AL445437.1-201ENST00000623157 3087 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 SNORA31-201ENST00000362607 130 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 AL513321.1-201ENST00000441175 761 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 SCARNA16.3-201ENST00000516595 184 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC021733.2-201ENST00000518830 497 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC068339.2-201ENST00000534395 618 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 7SK.7-201ENST00000603504 247 ntBASIC1.83□□□□□ -2.12
SPG11Q96JI7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.83□□□□□ -2.12
SPG11Q96JI7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 RPL31P41-201ENST00000477967 372 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AC092185.1-201ENST00000491371 97 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 RPL38P4-201ENST00000502376 214 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AC119751.1-201ENST00000513357 765 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 AC009501.3-201ENST00000605001 1352 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AC007336.1-201ENST00000576365 3828 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 RNU1-57P-201ENST00000384491 166 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 MIR3074-201ENST00000384885 81 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AC019129.1-201ENST00000403786 261 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 AC234781.4-201ENST00000419384 244 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AL034379.1-201ENST00000423216 253 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 RNU1-123P-201ENST00000458950 160 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 NAMPTP2-201ENST00000505629 1115 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 Y_RNA.681-201ENST00000516445 113 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 AMZ2P1-203ENST00000565833 850 ntBASIC1.82□□□□□ -2.12
SPG11Q96JI7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.82□□□□□ -2.12
SPG11Q96JI7 RNA5SP456-201ENST00000364002 114 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.81□□□□□ -2.12
SPG11Q96JI7 RNU2-2P-201ENST00000410396 191 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.81□□□□□ -2.12
SPG11Q96JI7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.81□□□□□ -2.12
SPG11Q96JI7 AC117532.1-201ENST00000514638 323 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.81□□□□□ -2.12
SPG11Q96JI7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.81□□□□□ -2.12
SPG11Q96JI7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.81□□□□□ -2.12
SPG11Q96JI7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.81□□□□□ -2.12
SPG11Q96JI7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.81□□□□□ -2.12
SPG11Q96JI7 U2.15-201ENST00000611544 191 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 U2.16-201ENST00000613119 191 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 U2.12-201ENST00000613778 191 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 U2.20-201ENST00000613956 192 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 U2.9-201ENST00000615427 191 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 U2.11-201ENST00000616345 191 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 U2.2-201ENST00000616535 191 ntBASIC1.81□□□□□ -2.12
SPG11Q96JI7 U2.3-201ENST00000617785 191 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms