Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TTC28Q96AY4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TTC28Q96AY4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.08□□□□□ -2.08
TTC28Q96AY4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
TTC28Q96AY4 RNU6-1032P-201ENST00000384100 107 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 RPL21P3-201ENST00000395517 478 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 ATG3P1-201ENST00000419507 911 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 RPS12P5-201ENST00000423449 371 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 RPS26P40-201ENST00000435209 294 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 AL138799.3-201ENST00000438968 350 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.08□□□□□ -2.08
TTC28Q96AY4 RN7SKP60-201ENST00000516985 239 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TTC28Q96AY4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
TTC28Q96AY4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 AP000936.3-201ENST00000438127 255 ntBASIC2.07□□□□□ -2.08
TTC28Q96AY4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 AC104564.1-201ENST00000493028 407 ntBASIC2.07□□□□□ -2.08
TTC28Q96AY4 AC093278.1-201ENST00000494700 600 ntBASIC2.07□□□□□ -2.08
TTC28Q96AY4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 RNA5SP476-201ENST00000516613 103 ntBASIC2.07□□□□□ -2.08
TTC28Q96AY4 AC234775.3-201ENST00000564612 656 ntBASIC2.07□□□□□ -2.08
TTC28Q96AY4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.07□□□□□ -2.08
TTC28Q96AY4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TTC28Q96AY4 GTF2IP23-201ENST00000423746 351 ntBASIC2.07□□□□□ -2.08
TTC28Q96AY4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TTC28Q96AY4 RNA5SP337-201ENST00000517007 109 ntBASIC2.07□□□□□ -2.08
TTC28Q96AY4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
TTC28Q96AY4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TTC28Q96AY4 DDX10P1-201ENST00000448545 1933 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TTC28Q96AY4 MTND5P19-201ENST00000424872 1794 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 MIR625-201ENST00000385047 85 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 RPS26P24-201ENST00000497656 331 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 DYNLL1P6-201ENST00000503440 264 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TTC28Q96AY4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TTC28Q96AY4 Y_RNA.68-201ENST00000362881 102 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 AL606490.7-201ENST00000433136 191 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 AL590762.3-201ENST00000436372 640 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 HMGB1P31-201ENST00000437242 427 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 RPL23AP55-201ENST00000498163 452 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 AC021146.1-201ENST00000511202 716 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TTC28Q96AY4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.06□□□□□ -2.08
TTC28Q96AY4 MIR6132-201ENST00000622083 109 ntBASIC2.06□□□□□ -2.08
TTC28Q96AY4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TTC28Q96AY4 AC008432.1-201ENST00000615912 1320 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 OR10D4P-201ENST00000525892 951 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 OR7K1P-201ENST00000546439 926 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 AL512598.1-201ENST00000610158 273 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 uc_338.5-201ENST00000611839 155 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 AL160394.1-201ENST00000624765 724 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 FRG1DP-201ENST00000635586 771 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 MTND4P35-201ENST00000604257 1375 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 AC092326.2-201ENST00000624772 1561 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 MTND5P12-201ENST00000502851 1449 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TTC28Q96AY4 AL121834.1-202ENST00000404494 277 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 AC003989.2-201ENST00000440224 169 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 IGHV3-76-201ENST00000522465 295 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 AL390334.1-201ENST00000556395 450 ntBASIC2.05□□□□□ -2.08
TTC28Q96AY4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.05□□□□□ -2.08
TTC28Q96AY4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TTC28Q96AY4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TTC28Q96AY4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC2.04□□□□□ -2.08
TTC28Q96AY4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TTC28Q96AY4 AL035405.1-201ENST00000400795 710 ntBASIC2.04□□□□□ -2.08
TTC28Q96AY4 HMGB3P23-201ENST00000414981 585 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms