Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF1Q92994 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF1Q92994 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF1Q92994 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF1Q92994 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.28□□□□□ -1.56
BRF1Q92994 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.28□□□□□ -1.56
BRF1Q92994 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF1Q92994 RPL36AP53-201ENST00000432891 316 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 TAAR7P-201ENST00000436141 242 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF1Q92994 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF1Q92994 AC108734.1-201ENST00000439549 399 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 CBWD4P-201ENST00000445695 655 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AC073264.2-201ENST00000448886 166 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AC012671.1-201ENST00000451912 203 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 snoU13.7-201ENST00000459220 104 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AP001992.1-205ENST00000462248 379 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AL136126.1-201ENST00000473603 402 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 RPL5P22-201ENST00000480199 884 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF1Q92994 AC108022.1-201ENST00000493466 478 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF1Q92994 AC093767.1-201ENST00000504523 156 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 SNORD60.2-201ENST00000516883 86 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF1Q92994 OR5B19P-201ENST00000531766 928 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AP006289.1-201ENST00000538089 277 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 SETP2-201ENST00000553886 926 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 OR4T1P-201ENST00000554933 911 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
BRF1Q92994 MIR3146-201ENST00000580367 79 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF1Q92994 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF1Q92994 AC115621.1-201ENST00000604653 858 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AC009318.4-201ENST00000620496 486 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
BRF1Q92994 AC090574.1-201ENST00000623186 233 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.28□□□□□ -1.56
BRF1Q92994 MAPK10-320ENST00000641462 6696 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF1Q92994 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF1Q92994 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF1Q92994 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF1Q92994 SAMMSON-213ENST00000641336 1521 ntBASIC5.28□□□□□ -1.56
BRF1Q92994 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
BRF1Q92994 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRF1Q92994 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.27□□□□□ -1.57
BRF1Q92994 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRF1Q92994 RNU4-79P-201ENST00000362764 141 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 SNORA51.2-201ENST00000364595 132 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.27□□□□□ -1.57
BRF1Q92994 RNU6-1207P-201ENST00000384343 107 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
BRF1Q92994 RNU6-1068P-201ENST00000410958 103 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.27□□□□□ -1.57
BRF1Q92994 ELOCP4-201ENST00000420090 333 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC137499.1-201ENST00000427602 88 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 RPL23AP25-201ENST00000430973 463 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 RPS15AP9-201ENST00000439856 381 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC079781.2-201ENST00000446424 169 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.27□□□□□ -1.57
BRF1Q92994 PLGLA-201ENST00000465668 449 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC055855.1-201ENST00000489563 579 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.27□□□□□ -1.57
BRF1Q92994 AK3P4-201ENST00000504283 583 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 HMGN1P13-201ENST00000505795 138 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.27□□□□□ -1.57
BRF1Q92994 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.27□□□□□ -1.57
BRF1Q92994 AC093853.1-201ENST00000515689 483 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 RNA5SP401-201ENST00000515920 127 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 RNU6-1220P-201ENST00000517126 108 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.27□□□□□ -1.57
BRF1Q92994 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.27□□□□□ -1.57
BRF1Q92994 AP000907.2-201ENST00000530827 353 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.27□□□□□ -1.57
BRF1Q92994 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.27□□□□□ -1.57
BRF1Q92994 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.27□□□□□ -1.57
BRF1Q92994 AC037471.2-201ENST00000564941 598 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC090615.1-201ENST00000577519 154 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.27□□□□□ -1.57
BRF1Q92994 AL160290.3-201ENST00000604869 165 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC114546.3-201ENST00000623582 1734 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
BRF1Q92994 AC105074.1-201ENST00000623380 3095 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC125257.1-201ENST00000560400 2930 ntBASIC5.27□□□□□ -1.57
BRF1Q92994 AC027228.2-201ENST00000567141 2154 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.26□□□□□ -1.57
BRF1Q92994 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 MAPK10-286ENST00000641208 8747 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.26□□□□□ -1.57
BRF1Q92994 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 AC005332.5-201ENST00000591222 2919 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 AC079741.1-201ENST00000321498 212 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 RNA5SP258-201ENST00000362750 119 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms