Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC89Q8N998 TPTE2P4-201ENST00000258589 1605 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC087359.1-201ENST00000508335 1740 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 RNU6-1207P-201ENST00000384343 107 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 RNU6-906P-201ENST00000384700 70 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 EI24P2-201ENST00000397776 1076 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 RNA5SP317-201ENST00000410176 116 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 RNA5SP311-201ENST00000411290 116 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 HMGB3P20-201ENST00000417997 600 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 PPP1R11P2-201ENST00000423543 382 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AL590383.1-201ENST00000428602 75 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 OR4K11P-201ENST00000431829 904 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC114755.5-201ENST00000447760 831 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 MTND1P31-201ENST00000449206 961 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 RPL30P5-201ENST00000494923 336 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC006445.2-201ENST00000510061 472 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 RNA5SP315-201ENST00000516340 116 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 RNA5SP312-201ENST00000517068 116 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 RNU6-1231P-201ENST00000517185 103 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC89Q8N998 OR4T1P-201ENST00000554933 911 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 MIR4738-201ENST00000579134 87 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 MIR3609-201ENST00000582661 80 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC053481.4-201ENST00000583164 216 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 MTCO2P2-201ENST00000591258 225 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AL606490.9-201ENST00000603331 271 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC097478.2-201ENST00000610572 514 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC89Q8N998 AC092628.2-201ENST00000622492 339 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 AL159972.1-201ENST00000625150 448 ntBASIC3.85□□□□□ -1.79
CCDC89Q8N998 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC89Q8N998 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC89Q8N998 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC89Q8N998 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC89Q8N998 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC89Q8N998 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC89Q8N998 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC89Q8N998 RNU6-1078P-201ENST00000364522 103 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 Y_RNA.548-201ENST00000384656 105 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AL356421.1-201ENST00000403255 413 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 SNORA57.3-201ENST00000411095 141 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 GOT2P5-201ENST00000433995 546 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC092573.2-201ENST00000434546 243 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC084290.1-201ENST00000434995 374 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AL009048.1-201ENST00000450437 298 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 RPL7P18-201ENST00000478965 734 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC068724.1-201ENST00000487100 792 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC021146.8-201ENST00000507455 733 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 PCBP2P3-201ENST00000509726 843 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 FTH1P21-201ENST00000512179 511 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 RN7SKP122-201ENST00000515923 296 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 PDCL2P2-201ENST00000533651 189 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 MTND1P8-201ENST00000571424 950 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 MTCO3P24-201ENST00000572729 782 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC079089.3-201ENST00000603094 673 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC099778.2-201ENST00000610904 211 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 RNVU1-4-201ENST00000612985 164 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AC006338.2-201ENST00000616864 791 ntBASIC3.84□□□□□ -1.79
CCDC89Q8N998 AP000776.1-201ENST00000530032 1663 ntBASIC3.84□□□□□ -1.8
CCDC89Q8N998 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
CCDC89Q8N998 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC89Q8N998 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CCDC89Q8N998 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC89Q8N998 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC89Q8N998 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC89Q8N998 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC89Q8N998 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CCDC89Q8N998 TPMTP3-201ENST00000411928 735 ntBASIC3.83□□□□□ -1.8
CCDC89Q8N998 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms