Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC010546.1-201ENST00000569391 485 ntBASIC3.13□□□□□ -1.91
LTBP4Q8N2S1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.13□□□□□ -1.91
LTBP4Q8N2S1 AC025048.6-202ENST00000627667 438 ntBASIC3.13□□□□□ -1.91
LTBP4Q8N2S1 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LTBP4Q8N2S1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBP4Q8N2S1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.13□□□□□ -1.91
LTBP4Q8N2S1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 RNA5SP210-201ENST00000391034 120 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 HSPD1P16-201ENST00000402302 394 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 AC009302.1-201ENST00000417147 390 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 UBE2V2P3-201ENST00000433562 437 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 TPTE2P1-204ENST00000435256 593 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 AC022431.1-201ENST00000450941 438 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 AC069277.2-201ENST00000454211 432 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 TVP23BP2-201ENST00000455082 615 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 OR4A45P-201ENST00000529954 901 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 AC083760.1-201ENST00000589621 670 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 AC012213.4-201ENST00000606457 354 ntBASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.12□□□□□ -1.91
LTBP4Q8N2S1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 SNORA11.4-201ENST00000408823 129 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 EI24P1-201ENST00000416584 867 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC022784.5-201ENST00000522241 437 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC079791.1-201ENST00000605356 973 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC019155.1-201ENST00000382242 574 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 MTCYBP7-201ENST00000419540 1134 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 MRPL50P4-201ENST00000446432 475 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC107398.1-201ENST00000486904 505 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC025857.1-201ENST00000525252 377 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC091515.1-201ENST00000548110 679 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 RPAP2P1-201ENST00000603626 1168 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AC019131.2-201ENST00000609071 870 ntBASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
LTBP4Q8N2S1 AL136964.1-201ENST00000622038 2990 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 RPL9P7-201ENST00000330965 580 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 RNY1-201ENST00000364228 113 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 RNU6-775P-201ENST00000459318 96 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 RNU6-319P-201ENST00000516025 108 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 SCARNA16.3-201ENST00000516595 184 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 AC123904.3-201ENST00000547218 814 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 AC012182.1-201ENST00000570133 895 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 MIR3199-1-201ENST00000582434 88 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 MIR6766-201ENST00000622641 72 ntBASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
LTBP4Q8N2S1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 RPL31P53-201ENST00000457065 348 ntBASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 AC084033.1-201ENST00000550830 633 ntBASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 AL450326.2-201ENST00000421913 1962 ntBASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LTBP4Q8N2S1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.09□□□□□ -1.92
LTBP4Q8N2S1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.09□□□□□ -1.92
LTBP4Q8N2S1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LTBP4Q8N2S1 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.09□□□□□ -1.92
LTBP4Q8N2S1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.92
LTBP4Q8N2S1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
LTBP4Q8N2S1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LTBP4Q8N2S1 AC233981.2-201ENST00000611524 1614 ntBASIC3.08□□□□□ -1.92
LTBP4Q8N2S1 Y_RNA.191-201ENST00000363972 113 ntBASIC3.08□□□□□ -1.92
LTBP4Q8N2S1 RNU6-178P-201ENST00000384631 104 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms