Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 MIR449B-201ENST00000384995 97 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC016769.3-201ENST00000396562 315 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 RNA5SP129-201ENST00000410276 118 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 RPS3AP25-201ENST00000411660 793 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC069282.1-201ENST00000411911 526 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 MRPL50P2-201ENST00000416821 482 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC092634.6-201ENST00000418558 192 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 YME1L1P1-201ENST00000429435 297 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC104332.2-201ENST00000429959 156 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC004022.1-201ENST00000447766 1066 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC010301.1-201ENST00000473936 355 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 HMGN2P13-201ENST00000476476 274 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 RPL7P23-201ENST00000493874 747 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AP002812.1-201ENST00000495378 474 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 HSPD1P15-201ENST00000505573 1122 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 SNORA48.10-201ENST00000516965 160 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 CCNG2P1-201ENST00000549521 1000 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC126177.3-201ENST00000551839 688 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 MIR4429-201ENST00000580105 73 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AP003973.1-201ENST00000604639 691 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AL583856.2-201ENST00000606298 543 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC018926.1-201ENST00000616335 435 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC018692.3-201ENST00000623929 123 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 AC009487.2-201ENST00000420969 6821 ntBASIC3.18□□□□□ -1.9
CCDC50Q8IVM0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 SNORA71.3-201ENST00000362582 128 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 SNORA51.6-201ENST00000384151 125 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 SNORA7.4-201ENST00000384249 137 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 U3.19-201ENST00000390893 196 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 RNU1-101P-201ENST00000391171 127 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 SAR1AP2-201ENST00000392696 594 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC092447.6-201ENST00000414578 210 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 RABEPKP1-201ENST00000440529 1026 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC091153.1-201ENST00000466297 402 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AL024509.2-201ENST00000493462 493 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC093767.1-201ENST00000504523 156 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC004062.1-201ENST00000509926 645 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 MTCO2P32-201ENST00000514865 403 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 RN7SKP272-201ENST00000516988 232 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 OR4P1P-201ENST00000530808 1136 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC090502.2-201ENST00000549267 280 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AL121603.1-201ENST00000553815 142 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 LARP7P2-201ENST00000575306 125 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC006504.3-201ENST00000586818 523 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC008507.2-201ENST00000588402 1176 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 CCDC58P3-201ENST00000590792 430 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC012669.1-201ENST00000603209 283 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AC008083.4-201ENST00000615076 444 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AL512427.1-201ENST00000618593 349 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 MIR7975-201ENST00000619350 68 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AP000943.4-201ENST00000622912 357 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 AL645568.2-201ENST00000432815 1337 ntBASIC3.17□□□□□ -1.9
CCDC50Q8IVM0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 RNU6-821P-201ENST00000390995 107 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 U3.29-201ENST00000391296 212 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 HSPE1P1-201ENST00000421494 318 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 C1DP1-201ENST00000426049 402 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms