Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNU5A-6P-201ENST00000384136 116 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 SNORA40.3-201ENST00000390964 122 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 RN7SKP266-201ENST00000410232 287 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 Y_RNA.598-201ENST00000410480 95 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC073136.2-201ENST00000417282 849 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AIMP1P1-201ENST00000418670 937 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AL356583.2-201ENST00000426536 280 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC109583.1-201ENST00000432156 268 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC244505.5-201ENST00000443639 207 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC239809.1-201ENST00000450470 217 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 RPS15AP17-201ENST00000470598 390 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC006511.1-201ENST00000470614 315 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC010301.1-201ENST00000473936 355 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 MTND6P6-201ENST00000478031 263 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 NRON-201ENST00000517270 370 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 BNIP3P11-201ENST00000603878 563 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AL008729.2-201ENST00000606393 473 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC097468.3-201ENST00000607956 456 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC103710.4-201ENST00000609301 899 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC131902.3-201ENST00000611767 581 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC091834.1-201ENST00000614543 472 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC108479.2-201ENST00000617314 601 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AL118496.1-201ENST00000440201 1812 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC006378.2-201ENST00000623178 2476 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 SNORA71.3-201ENST00000362582 128 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 Y_RNA.248-201ENST00000364501 109 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 SNORD3H-201ENST00000384486 214 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 RNU6-441P-201ENST00000384545 106 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 MIR513A2-201ENST00000385249 127 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 U8.14-201ENST00000390843 143 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AL121972.1-201ENST00000402023 252 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 MIR548F1-201ENST00000408667 84 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 USP9YP13-201ENST00000417797 480 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 IPMKP1-201ENST00000425988 855 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 UBE2V1P8-201ENST00000437166 265 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 GDI2P2-201ENST00000445131 608 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 VN1R34P-201ENST00000447387 883 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 ARPC3P5-201ENST00000448802 534 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 PAXBP1P1-201ENST00000449315 447 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC003071.1-201ENST00000451219 789 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 RNU7-136P-201ENST00000458819 69 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AL133162.1-201ENST00000463228 453 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AL358832.1-201ENST00000497800 389 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC091133.4-201ENST00000511142 308 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC053481.3-201ENST00000577881 843 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 MIR4307-201ENST00000582802 84 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 AC104010.1-201ENST00000616889 150 ntBASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBE3BQ7Z3V4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC087190.4-201ENST00000574616 8334 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms