Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 Y_RNA.41-201ENST00000362646 102 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 RNU4-1-201ENST00000363925 141 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 RNU6-1215P-201ENST00000384441 102 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 RNU1-44P-201ENST00000384453 163 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AL109755.1-201ENST00000401791 649 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 SPTLC1P2-201ENST00000407089 121 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 Y_RNA.599-201ENST00000410489 109 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 RSU1P3-201ENST00000412878 835 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AF274854.1-201ENST00000413236 615 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 ELOCP17-201ENST00000414751 326 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC137499.1-201ENST00000427602 88 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 FTH1P6-201ENST00000430768 320 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC090774.1-201ENST00000435925 246 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC104850.1-201ENST00000435940 476 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 RN7SL177P-201ENST00000476596 299 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 RBM43P1-201ENST00000476891 1081 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC110792.1-201ENST00000491826 472 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 RN7SL808P-201ENST00000496066 299 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC107401.1-201ENST00000503426 685 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC004062.1-201ENST00000509926 645 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 MTND4LP31-201ENST00000514859 294 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC091178.1-203ENST00000584586 279 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 DEFB131E-202ENST00000602581 683 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC095031.1-201ENST00000623685 672 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 MIR4275-201ENST00000636486 87 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 TAB3P1-202ENST00000452645 1634 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 AC139713.2-214ENST00000642059 1811 ntBASIC4.28□□□□□ -1.72
RNF220Q5VTB9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 LINC02471-203ENST00000641941 4752 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 RNU5E-8P-201ENST00000363502 116 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 RNA5SP322-201ENST00000363617 119 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 RNU6-173P-201ENST00000364215 104 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AL109941.1-201ENST00000401925 229 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 Z98745.1-201ENST00000402553 494 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 RPS3AP24-201ENST00000407896 734 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 RNA5SP239-201ENST00000410218 129 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 RPL7AP73-201ENST00000413490 353 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC140479.3-201ENST00000418944 1126 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 DUTP6-201ENST00000425573 462 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC079780.1-201ENST00000428259 207 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC016831.4-201ENST00000438302 307 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 NANOGNBP1-201ENST00000448444 480 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 RPS15AP36-201ENST00000492022 382 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC091133.4-201ENST00000511142 308 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 RN7SKP276-201ENST00000516242 268 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC105233.3-201ENST00000531125 744 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AP001880.2-201ENST00000538233 448 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 FAM60BP-201ENST00000578364 658 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 SDR42E1P1-201ENST00000611327 477 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC013476.2-201ENST00000614456 459 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC136475.10-201ENST00000620253 385 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC138649.3-201ENST00000622154 254 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 C2orf27A-204ENST00000623058 969 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 AC099654.12-201ENST00000639868 649 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms