Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.97□□□□□ -2.09
RIF1Q5UIP0 GTF2H2B-203ENST00000508065 1432 ntBASIC1.97□□□□□ -2.09
RIF1Q5UIP0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
RIF1Q5UIP0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.97□□□□□ -2.09
RIF1Q5UIP0 AL138799.3-201ENST00000438968 350 ntBASIC1.97□□□□□ -2.09
RIF1Q5UIP0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.97□□□□□ -2.09
RIF1Q5UIP0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.97□□□□□ -2.09
RIF1Q5UIP0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.97□□□□□ -2.09
RIF1Q5UIP0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.97□□□□□ -2.09
RIF1Q5UIP0 MTND5P35-201ENST00000557537 1720 ntBASIC1.96□□□□□ -2.09
RIF1Q5UIP0 AC008432.1-201ENST00000615912 1320 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 RNU1-87P-201ENST00000363727 170 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.96□□□□□ -2.1
RIF1Q5UIP0 HSPE1P28-201ENST00000443139 211 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AC104564.1-201ENST00000493028 407 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 ATP5EP1-201ENST00000510257 156 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AC110588.1-201ENST00000559699 137 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.96□□□□□ -2.1
RIF1Q5UIP0 MTCO1P22-201ENST00000604619 1360 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.96□□□□□ -2.1
RIF1Q5UIP0 RNA5SP502-201ENST00000362694 119 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 SNORA48.3-201ENST00000391081 134 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 PPP1R2P5-201ENST00000457256 603 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.96□□□□□ -2.1
RIF1Q5UIP0 RN7SKP40-201ENST00000517211 242 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 OR4R2P-201ENST00000530815 597 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AC110741.2-201ENST00000605278 268 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AL450489.1-201ENST00000612071 468 ntBASIC1.96□□□□□ -2.1
RIF1Q5UIP0 AL391987.6-201ENST00000305671 199 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 AC002553.2-201ENST00000453217 340 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 ARL4AP2-201ENST00000507378 601 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 LTV1P1-201ENST00000510683 1237 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 AF186190.1-201ENST00000517470 480 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 AC107871.2-201ENST00000612894 502 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 AC008121.2-201ENST00000614647 523 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 MIR6132-201ENST00000622083 109 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 AC233981.2-201ENST00000611524 1614 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 RNA5SP129-201ENST00000410276 118 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 TOMM22P6-201ENST00000465035 409 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 RPL23AP55-201ENST00000498163 452 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 RNA5SP380-201ENST00000517190 98 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.95□□□□□ -2.1
RIF1Q5UIP0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RIF1Q5UIP0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AL590762.3-201ENST00000436372 640 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 TXNP6-201ENST00000510190 310 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AC087441.2-201ENST00000529141 262 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 MTND4P35-201ENST00000604257 1375 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 RNA5SP296-201ENST00000410523 111 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 RNU2-6P-201ENST00000411404 190 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AC004965.1-201ENST00000413033 213 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AC013404.1-201ENST00000413068 249 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 RPL23AP39-201ENST00000415533 405 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 RAC1P3-201ENST00000416129 580 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AC017078.1-201ENST00000416146 368 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AC093767.1-201ENST00000504523 156 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.94□□□□□ -2.1
RIF1Q5UIP0 AC093831.2-201ENST00000624393 3427 ntBASIC1.94□□□□□ -2.1
RIF1Q5UIP0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RIF1Q5UIP0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
RIF1Q5UIP0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RIF1Q5UIP0 AL354719.1-201ENST00000406535 843 ntBASIC1.93□□□□□ -2.1
RIF1Q5UIP0 AL513175.2-201ENST00000422071 443 ntBASIC1.93□□□□□ -2.1
RIF1Q5UIP0 AC092185.1-201ENST00000491371 97 ntBASIC1.93□□□□□ -2.1
RIF1Q5UIP0 AC021146.8-201ENST00000507455 733 ntBASIC1.93□□□□□ -2.1
RIF1Q5UIP0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.93□□□□□ -2.1
RIF1Q5UIP0 AC122134.1-201ENST00000565664 1104 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms