Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MIR583-201ENST00000384846 75 ntBASIC1.34□□□□□ -2.2
UBR4Q5T4S7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 FABP5P13-201ENST00000452144 328 ntBASIC1.34□□□□□ -2.2
UBR4Q5T4S7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 AC016727.2-201ENST00000603988 621 ntBASIC1.34□□□□□ -2.2
UBR4Q5T4S7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 SCN1A-220ENST00000641603 12506 ntBASIC1.34□□□□□ -2.2
UBR4Q5T4S7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 RNU2-17P-201ENST00000410290 190 ntBASIC1.34□□□□□ -2.2
UBR4Q5T4S7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.34□□□□□ -2.2
UBR4Q5T4S7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 AC016590.3-201ENST00000611171 753 ntBASIC1.34□□□□□ -2.2
UBR4Q5T4S7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.34□□□□□ -2.2
UBR4Q5T4S7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 MTND4P1-201ENST00000457501 1466 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AC023825.1-201ENST00000566704 1030 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AC105245.1-201ENST00000581934 244 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AL359198.2-201ENST00000611836 194 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 RN7SKP247-201ENST00000411094 308 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 RPL27AP8-201ENST00000424277 446 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 RPS26P3-201ENST00000470205 348 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 RPL30P6-201ENST00000475925 342 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AC026436.1-201ENST00000510537 270 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AL355493.4-201ENST00000618530 292 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 SSXP10-201ENST00000402595 565 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 PIGFP3-201ENST00000441918 722 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 RPL38P4-201ENST00000502376 214 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AL512598.1-201ENST00000610158 273 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AC104307.1-201ENST00000616142 196 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 MIR221-201ENST00000385135 110 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 AL591416.1-201ENST00000404015 867 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC1.33□□□□□ -2.2
UBR4Q5T4S7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
UBR4Q5T4S7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 RNU6-1305P-201ENST00000364353 104 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC068339.2-201ENST00000534395 618 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC019080.5-201ENST00000624891 757 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC092593.1-201ENST00000515413 1815 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 U3.6-201ENST00000363622 211 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 MIR1265-201ENST00000408444 86 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC011979.1-201ENST00000472300 483 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 CCNHP1-201ENST00000513311 678 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 HPRT1P3-201ENST00000539521 576 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC007424.1-203ENST00000554613 687 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC245036.5-201ENST00000596330 847 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC074276.2-201ENST00000619891 348 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AL138955.1-201ENST00000622881 1040 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 RN7SKP140-201ENST00000411196 284 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 RPS29P12-201ENST00000460178 152 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 MIR1291-201ENST00000627649 87 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 RNU6-43P-201ENST00000384302 107 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 RNA5SP127-201ENST00000411051 133 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 OR2X1P-201ENST00000421144 687 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC119618.1-201ENST00000434191 222 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AP001960.1-201ENST00000506494 658 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 RNA5SP154-201ENST00000516193 111 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC021269.2-201ENST00000532318 330 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms