Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MTND5P1-201ENST00000445440 1375 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 AC090740.1-201ENST00000623193 2262 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 AL049780.3-201ENST00000624612 1583 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 ATP5F1P3-201ENST00000397213 657 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 AL513331.1-201ENST00000411908 397 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 MTCYBP34-201ENST00000439552 670 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 MTCYBP12-201ENST00000440559 1134 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 IPO7P1-201ENST00000442031 636 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 AC008280.2-201ENST00000455473 307 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 GTF2IP9-201ENST00000502460 301 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 AC026427.2-201ENST00000506228 536 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 SNORA31.21-201ENST00000517180 77 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 RPS15AP11-201ENST00000594193 385 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 AL109618.2-201ENST00000605527 211 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 CRYM-AS1-204ENST00000637983 556 ntBASIC2.25□□□□□ -2.05
CCDC58Q4VC31 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC58Q4VC31 MTND4P31-201ENST00000425607 1343 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 HMGB1P5-201ENST00000255320 642 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 RNA5SP456-201ENST00000364002 114 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 SNORA18.3-201ENST00000384122 132 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 ARL4AP4-201ENST00000434170 518 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 MRPS33P4-201ENST00000434892 317 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 IFNA11P-201ENST00000446352 526 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AL157827.1-201ENST00000447622 132 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC108734.3-201ENST00000481241 1165 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC087241.2-201ENST00000535801 324 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 SNORD53-201ENST00000579969 78 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC125494.3-201ENST00000602759 455 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AL009028.1-201ENST00000604895 802 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC245884.12-201ENST00000615364 59 ntBASIC2.24□□□□□ -2.05
CCDC58Q4VC31 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC58Q4VC31 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 RPL21P132-201ENST00000331267 462 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 OR5H2-201ENST00000355273 945 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AL162578.1-201ENST00000406202 378 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 U3.40-201ENST00000408706 208 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 MTCO2P17-201ENST00000424336 677 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AL135752.1-201ENST00000479477 471 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 FAM172BP-201ENST00000487497 1089 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 OR5BM1P-201ENST00000512021 366 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 RNA5SP341-201ENST00000516261 117 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AC087272.1-201ENST00000523624 533 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 NDUFS5P6-201ENST00000529136 295 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AC243972.3-201ENST00000539655 198 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 CYCSP39-201ENST00000565821 309 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AC009127.3-201ENST00000570531 403 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AC135178.6-201ENST00000605314 398 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AC093732.2-201ENST00000607950 274 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CCDC58Q4VC31 AL359893.1-201ENST00000447628 1580 ntBASIC2.23□□□□□ -2.05
CCDC58Q4VC31 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CCDC58Q4VC31 SNORA9-201ENST00000384215 133 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 RNU6-301P-201ENST00000384277 107 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 SNORA41-201ENST00000384675 132 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms